DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp5 and actr5

DIOPT Version :9

Sequence 1:NP_001262697.1 Gene:Arp5 / 42173 FlyBaseID:FBgn0038576 Length:648 Species:Drosophila melanogaster
Sequence 2:XP_002932900.2 Gene:actr5 / 100144650 XenbaseID:XB-GENE-490964 Length:591 Species:Xenopus tropicalis


Alignment Length:657 Identity:215/657 - (32%)
Similarity:353/657 - (53%) Gaps:133/657 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GKRVLVIDNGSYECRVGWSDSKEPDLRFRNVLTKPRKDRKKEAAASEGSASQTTVEQSAEIQVGN 67
            |..|||:||||::.|.||:.: .|.|:.|:|:           |.|.|.....:       :|||
 Frog    30 GPAVLVLDNGSFQLRAGWAGA-GPALQLRSVV-----------ARSRGGPRSLS-------RVGN 75

  Fly    68 DITNIEAVRAHLKSPFERNVITNWNHQEQIFDYIFTKMGFDGQDKIDHPIILTEALANPNFCRQQ 132
            ||.::|.:|..|::||:|||..|...||.:.|::|.|:|...:..:|:||:.|||...|...||.
 Frog    76 DIPSLEPLRWLLRTPFDRNVPVNLELQELLCDHVFQKLGIASEGCVDYPIVFTEAPCTPLHVRQM 140

  Fly   133 MNELLFECYGIPSVSYGIDALYSWKHHQQKQKNISDALIISFGYSTTHVIPVLDGKLQLEHVRRL 197
            ::|||||||.:|.||:|||.|||: :|..|..:.:..|::|.||..||::|||.|:|..::.:|:
 Frog   141 VSELLFECYRVPKVSFGIDGLYSF-YHNNKDLSPASGLVVSSGYHCTHILPVLRGRLDAKNCKRI 204

  Fly   198 NVGGYHIITYLFRLMQMKYPVHLNAITISRMEKLVHEHCHIAVDYKEELVQWAQMDYYDEHIMKI 262
            |:||:|.:|||.||:|:|||.|:.|||:||||:::||||::..||.:||.:|...|||:|::.|:
 Frog   205 NIGGFHSVTYLQRLLQLKYPGHVPAITLSRMEEILHEHCYVPEDYIDELRKWRCPDYYEENVHKM 269

  Fly   263 QLPYNAVTATNAMLTAEQKQEKRRELAHRLLDIKKNREQEKLREDEQQLFVYNKLRQLYEQKKLD 327
            |||::.....:| :.:|:|||:|::...||.::...|.:|||::|:::|.....:::|.|..:::
 Frog   270 QLPFSTKLLASA-IPSEEKQERRQQQLKRLQELNARRREEKLQQDQERLERLLYVQELLEDGQVE 333

  Fly   328 KFERALQQQQIGTLEDLDSLIATINSRIKRAQERAQSGPRPSKQQERLNKMPKPPEGMSQADWLA 392
            :|.:||.:..:.:.|:|.|.|..:...:::.::|...        :.|:..|:.||.:       
 Frog   334 QFHKALVELNMDSAEELQSYIHKLGMAVEQGRQRVLG--------DALDSKPQTPEQV------- 383

  Fly   393 ELQGKREKILGRKQARQQQRSEQAKRHTHAAQERMRIISSLAKNEKRRKANGEEEDDGFGMNDND 457
                                                               |.|:|:..|:::.:
 Frog   384 ---------------------------------------------------GGEQDEMEGISEVE 397

  Fly   458 WDVYKRINRYNDDSDSDADNEKLMQFDKILNHYDANTDGNSNVPPQSAAENYQLHFGVENIRVPE 522
                   ..|.:|   ..:.||....  :.|.:             :.||.:|::.|.|.|||||
 Frog   398 -------PAYTED---QVETEKAAPV--VQNMF-------------NMAEYHQMYLGTERIRVPE 437

  Fly   523 VLFQPSMIGCSEAGLAELIAFVLKLFPAAEQQRLVEHVYLTGGCAQFKGLKERLIKELMEMRPFQ 587
            :|||||::|..:|||||.:.::|..:|...||.||::|:||||...:.|:|.|:.|||:::|||.
 Frog   438 ILFQPSLMGEDQAGLAETLQYILDRYPQEVQQELVQNVFLTGGNVIYPGIKGRMEKELVQIRPFG 502

  Fly   588 SKFAIYESDEPTLSAWLGACVHAGEPTFGQTL---------TTRQDHQEHGREFFREHTASNIF- 642
            |.|.:..:..|.|.||.||.        |..|         .:|::::|.|.|:.:||.|||.| 
 Frog   503 SSFQVSLASHPVLDAWQGAS--------GWALQNVDCEEGWVSRKEYEEMGGEYLKEHVASNRFS 559

  Fly   643 ---YPTP 646
               .|.|
 Frog   560 EIQLPKP 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp5NP_001262697.1 COG5277 1..637 CDD:227602 208/642 (32%)
actr5XP_002932900.2 COG5277 34..553 CDD:227602 206/638 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 177 1.000 Domainoid score I3533
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H6818
Inparanoid 1 1.050 337 1.000 Inparanoid score I2340
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D178343at33208
OrthoFinder 1 1.000 - - FOG0005644
OrthoInspector 1 1.000 - - oto103569
Panther 1 1.100 - - LDO PTHR11937
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4046
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

Return to query results.
Submit another query.