DRSC/TRiP Functional Genomics Resources

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Protein Alignment cdm and KAP122

DIOPT Version :9

Sequence 1:NP_001262696.1 Gene:cdm / 42171 FlyBaseID:FBgn0261532 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_011499.1 Gene:KAP122 / 852868 SGDID:S000002984 Length:1081 Species:Saccharomyces cerevisiae


Alignment Length:1107 Identity:207/1107 - (18%)
Similarity:394/1107 - (35%) Gaps:267/1107 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DIARLEEAVVSFYRSNSQNQAITHEWLTDAEASPQAWQFSWQLMQLGK-SQEVQFFGAITLHSKL 68
            ::..|.|.:.|.:..:..||  ..:.|...:.|.|.:..:.:|:...| |..|::|||:||..:|
Yeast     6 EVVALIEELYSPHPKHDVNQ--IQQSLQSIQKSEQGFHLANELLSDDKYSANVKYFGALTLTVQL 68

  Fly    69 MKHWHEVPPENREELKQKILES----IVRFA----------GGPKIVLNRLCISLGAYIV----- 114
                 ....||..|....:..|    :.:|:          |...|::.:|..:|.....     
Yeast    69 -----NTRGENDYETLWNVFRSNLLYLTKFSTLYVSNPNMYGQSLIIIKKLMSNLSLIFTKINDP 128

  Fly   115 --------HMLGEWPGAIEEVINTF------QNQRMPNVSADVQLWIMLEVLTAIPEEAQVIHTS 165
                    :|:.:|    ...||||      |||   |::||..|...:.......:.:|.:..|
Yeast   129 QLNNAGNENMIKQW----NNPINTFIQLMSVQNQ---NINADQLLLDSINCSLTYEQLSQFVSLS 186

  Fly   166 VKRVVLRAEIAKRV--QLVIHTVERYLKLQMNRVWDAEAY------SNMNRAVK---------CV 213
            .|...|.....:.:  .|.....:|:...|::.|.....|      .|:|...:         |:
Yeast   187 QKHNELALTFTEVIVEDLTKFQTKRHSMSQIHEVVHEHLYISTMALINLNLTAQAVFNPTVFDCI 251

  Fly   214 GTWIKNIGYT----IEGCVTITAVLLEVVHKCYWPCIHAGDGCMTADENELAESCLKTMVNI--- 271
            ..||..|..|    ..|.:.::.:...::...|    .:.:|   :|..|.||..|....|:   
Yeast   252 TAWINYISLTRSVSSSGRMDLSEIFQNLIDLMY----QSTEG---SDGYENAEKILTIFGNVFAN 309

  Fly   272 ---IIQPDCHNYPKTAFVLIKMFLDSLSEIT-KTEWKRENDN----EDIIVHIYMLFVSSVE--R 326
               ::..|.....:..|:.:......:::|: |..|..:..|    .|....:..|.:..|:  :
Yeast   310 DPLLMSYDLRQQIECIFLGVVRPDSGITDISNKNSWMLQYMNYLVTNDFFSELKELAICIVDFLQ 374

  Fly   327 HSTL-----LLSGITSAD--PELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMLQDEV 384
            .:||     |.:.|.:||  ......:...::.:|..|:.|....::|..|...:.||..|.|..
Yeast   375 INTLSVCNKLFTNIQAADNGQVQDEYIQEYIKVLLQMTNFPLTPVLQEFFSVRMVDFWLDLSDAY 439

  Fly   385 FAMSNDEQKHKCWEYIKPLYAHLTRILVRKSEQPDEKSL--AKWSSDDLECFRCYRQDISDTFMY 447
            ..::::..:....|....::..|..|.:.|.....::.:  .:..|..:..|..:|..:||....
Yeast   440 TNLASETLRPNSIELSTQIFQQLINIYLPKISLSVKQRIIEEEGESTSVNEFEDFRNAVSDLAQS 504

  Fly   448 CYDVL-ND-----------------------------YILEILAAMLDEAIADLQRHPTHWTK-- 480
            .:.:| ||                             :.:|.:..:|:..:.|:....:.|.|  
Yeast   505 LWSILGNDNLTNVLIDGMGQMPAASDETLIIKDTDVLFRIETMCFVLNTILVDMTLSESPWIKNI 569

  Fly   481 LEACIYSFQSVAEHF-GGEEKRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMENPAYI 544
            ::|..:..|:|...| .|.:.....::.::|      ||:.....|.|  :|:...:..:.|..:
Yeast   570 VDANKFFNQNVISVFQTGFQTSASTKVSQIL------KLDFVRTSTTL--IGTLAGYFKQEPFQL 626

  Fly   545 PPAINLLVRGL----------------NSSMSAQATLGLKELCRDCQLQLKPYADPLLNACHASL 593
            .|.:..|.:||                |..:.......:..||..|:.:|.||....:    :.|
Yeast   627 NPYVEALFQGLHTCTNFTSKNEQEKISNDKLEVMVIKTVSTLCETCREELTPYLMHFI----SFL 687

  Fly   594 NTGRMKNSD-----SVRLMFSIGKLMSLL---RPEEIPKY---LDIIVSPCFEELQAICQADSKT 647
            ||..|.:|:     ..:|:.|||.::...   .|||..||   |..::|...|.    |.|.|  
Yeast   688 NTVIMPDSNVSHFTRTKLVRSIGYVVQCQVSNGPEEQAKYILQLTNLLSGSIEH----CLASS-- 746

  Fly   648 PAARIRTIFRLNMISTLFSSLNTDVDEQATDQPIVQPVLLVMQRTMPIFKRIAE---MWVEEIDV 709
                    .:|.......:.|...:.|.||.  ::||..::  ....:.:|::|   .|  ..|.
Yeast   747 --------VQLQEQQDYINCLLYCISELATS--LIQPTEII--ENDALLQRLSEFQSFW--SSDP 797

  Fly   710 LE----AACSAMKHAITNLRSSFQPMLQDLCLFI--------------------VASFQTRCCAP 750
            |:    ..|:..|....::.......::..||.:                    |.:|..| ..|
Yeast   798 LQIRSKIMCTIDKVLDNSIYCKNSAFVEIGCLIVGKGLNLPDGEPYFLKYNMSEVMNFVLR-HVP 861

  Fly   751 TLEISKTAIVMFFKDEGCKP----LMQQLLREFIQHSFKLFESTPEQNFSNISDTMETFFGCLTQ 811
            ..|::.           |.|    |:::|:.||.:      |.||::........:..::..   
Yeast   862 NCELAT-----------CLPYFVYLLEKLISEFRK------ELTPQEFDFMFEKILLVYYDA--- 906

  Fly   812 IIKKIPQVLEDKTLAYDRLVFYAQRGMT----------LP---------ESGAIRNSIQFLTHFV 857
            .|...|.:|: .|:.:...|...:.|:.          ||         |...|....:|.|..:
Yeast   907 YIINDPDLLQ-MTIGFVNNVLDVKPGLAIGSKHWTSFILPQFLKLIPSREKFTIVAVAKFWTKLI 970

  Fly   858 MQSR-NHAHVTEV---VLATGEQTLYTAMMCVGYLTPRSQVDKFADILLAMNRKYAAEMAVWMKS 918
            ...: |...:|.|   |.:.|...:|..|..: :.|.||.::.:.|:|.|:..|:..|...|:.:
Yeast   971 NNKKYNQEELTTVRQQVSSIGGDLVYQIMYGL-FHTQRSDLNSYTDLLRALVAKFPIEAREWLVA 1034

  Fly   919 LM 920
            ::
Yeast  1035 VL 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdmNP_001262696.1 IBN_N 28..92 CDD:281761 17/68 (25%)
Xpo1 98..>217 CDD:285575 28/154 (18%)
KAP122NP_011499.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341958
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2022
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12363
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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