DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cdm and MOS14

DIOPT Version :10

Sequence 1:NP_650682.1 Gene:cdm / 42171 FlyBaseID:FBgn0261532 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_201066.2 Gene:MOS14 / 836381 AraportID:AT5G62600 Length:958 Species:Arabidopsis thaliana


Alignment Length:1020 Identity:223/1020 - (21%)
Similarity:425/1020 - (41%) Gaps:141/1020 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LEEAVVSFYRSNSQNQAI-THEWLTDAEASPQAWQFSWQLMQLGKSQ-EVQFFGAITLHSKLMKH 71
            ::||:.:.|........: ...||.:.:.:..|||.:..|:....|. |...|.:.||.||:.:.
plant     7 VKEALNALYHHPDDTVRVHADRWLQNFQGTLDAWQVADNLLHDSSSNLETLIFCSQTLRSKVQRD 71

  Fly    72 WHEVPPENREELKQKILESIVRFAGGPKIVLNRLCISLGAYIVHM-LGEW-PGAIEEVINTFQNQ 134
            :.|:||...::|:|.:...:.:|..||..|..::.|::.|..||: ..:| .|.|...:....:.
plant    72 FEELPPGAFQKLRQSLTTLLKKFHKGPPKVRTQISIAVAALAVHVPAADWGDGGIISWLRDEMHM 136

  Fly   135 RMPNVSADVQLWIMLEVLTAIPEEA---QVIHTSVKRVVLRAEIAKRVQLVIHTVERYLKLQMNR 196
            ....|..      .||:||.:|||.   ::.....:|.....|:..:::..:..:...||:...:
plant   137 HPEYVPG------FLELLTVLPEETFNYKIAARPDRRRQFEKELTSQMEAALSILSACLKISELK 195

  Fly   197 VWDAEAYSNMNRAVKCVGTWIKNIGYTIEGCVTITAVLLEVVHKCYWPCIHAGDGCMTADENELA 261
            ....||::          :|:: :.:.|.|  |:.|        |: |.:||....:..|  .|:
plant   196 EQVLEAFA----------SWLR-LRHGIPG--TVLA--------CH-PLVHAALSSLNCD--PLS 236

  Fly   262 ESCLKTMVNIIIQPDCHN-YPKTAFV-----LIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLF 320
            |:    .||:|.:...|. .|.:..:     ||::.:..:..:.........|.||:.. |..||
plant   237 EA----SVNVISELIHHTASPSSGGISAQTPLIQVIVPQILSLQAHLRDSSKDEEDVKA-IGRLF 296

  Fly   321 VSSVERHSTLLLSGITSADPELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMLQ---- 381
            ....:.:..|:.:|  |.:|  .::||.:::...|         .|...::|...||:.||    
plant   297 ADVGDSYVELIATG--SDEP--MVIVHALLEVTAH---------PEFDIASMTFNFWHSLQLMLT 348

  Fly   382 -DEVFAMSNDE-----QKHKCWEYIKPLYAHLTRILVRKSEQP-DEKSLAKWSSDDLECFRCYRQ 439
             .|.::....|     ::::.....:|.|..|..::..:.:.| |.:.|   |.:||:.|:..|.
plant   349 KRESYSSLGSEASIEVERNRRLHIFQPAYQSLVSLVGFRVQYPEDYQGL---SYEDLKEFKQTRY 410

  Fly   440 DISDTFMYCYDVL-NDYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQI 503
            .::|..:....:| .|..|:||...|.||.|....:...|...||.::...:::.:....|...:
plant   411 AVADVLIDAALILGGDTTLKILYMKLLEANAQTGNNFQDWRPAEAILFCIWAISNYVSVVEAEVM 475

  Fly   504 PRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMENPA---YIPPAINLLVRGLNSS--MSAQA 563
            |::|.:|..:|.:   .:||.||...:|:|..||...||   .:|..|.:|:.|:.:|  .:|.|
plant   476 PQVMALLQNLPQQ---AQLLQTACLLVGAYSKWLNAAPASVSILPSIIRILMSGMGTSEDCAAAA 537

  Fly   564 TLGLKELCRDCQLQLKPYADPLLNACHASLNTG---RMKNSDSVRLMFSIGKLMSLLRPEEIPKY 625
            .|..:..|.||:..|..|.:.|.|....::|.|   ::...||:.|:.::|.:::.|..::....
plant   538 ALAFRHTCDDCRKNLCGYFEDLFNIYCMAINGGGGYKVSAEDSLNLVEALGMVVTELPLDQAKGA 602

  Fly   626 LDIIVSPCFEELQAICQADSKTPAARIRTIFRLNMISTLFSSLNTDVDEQATDQPIVQPVLLVMQ 690
            |:.:.......|:...:.|.:...||..|: .::..:.||..:|         .|  :.|...:.
plant   603 LEKLCFSAASPLEEAAKEDLEKKHARELTV-HIDRFAFLFRYVN---------HP--EAVAAEIN 655

  Fly   691 RTMPIFKRI--AEMWVEEIDVLEAACSAMKHAITNLRSSFQPMLQDLCLFIVASFQTRCCAPTLE 753
            :...||:.|  |..|  ::..:|:.|.|.|:|:..........:.::...|...:|.......|.
plant   656 KHWAIFRVIFDARPW--DMRTMESLCRACKYAVRTSGRYIIDTIGEMLEKIQFHYQQHHQPCFLY 718

  Fly   754 ISKTAIVMFFKDEGCKPLMQQLLREFIQHSFKLFESTPEQNFSNISDTMETFFGCLTQIIKKIPQ 818
            :|...|.:|..|..|...::.|:.....|:..|..|..|  .:...|..:..|...::.::..|.
plant   719 LSSEVIKIFGSDPSCAVYLKNLIETLFAHTTCLMTSIKE--VTARPDIADDCFLLASRCLRYCPH 781

  Fly   819 VLEDKTLAYDRLVFYAQRGMTLPESGAIRNSIQFLT------------HFVMQSRN-----HAHV 866
            :.....: :..||..|..|:|:....|..:.:.|||            .||....|     .|.:
plant   782 LFIPSPI-FPALVNCAMIGITVQHREACHSILTFLTDIFDLEKSVNEEQFVRIRDNIIIPRGATI 845

  Fly   867 TEVVLATGEQTLYTAMMCVGYLTPRSQVDKFADILLAMNRKYAAEMAVWMKSLMSTPNFPTQLIT 931
            |.:::|:          ..|.| |.|::|.....|||:.|.|..:...|.|..:|.  .|...:|
plant   846 TRILIAS----------LAGAL-PSSRLDTVTYSLLALTRTYRLQAVSWAKESVSL--IPRTALT 897

  Fly   932 DADKTRY----TALIIKEKVNKRLLQ-QHLSEMAMKTRGLTEKFQ 971
            :.:.|::    :.:.....||..:.| :.||::..:.|.:.|..|
plant   898 ETESTKFLQALSDIAYGADVNSLIGQVEELSDVCRRNRTVQELVQ 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdmNP_650682.1 IBN_N 29..93 CDD:197981 18/64 (28%)
Xpo1 98..>220 CDD:462459 24/126 (19%)
Importin_rep 418..454 CDD:436727 10/37 (27%)
Importin_rep_3 838..912 CDD:465873 21/90 (23%)
MOS14NP_201066.2 IBN_N 26..91 CDD:197981 18/64 (28%)
Xpo1 98..243 CDD:462459 37/178 (21%)

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