DRSC/TRiP Functional Genomics Resources

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Protein Alignment cdm and CG10950

DIOPT Version :9

Sequence 1:NP_001262696.1 Gene:cdm / 42171 FlyBaseID:FBgn0261532 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_611200.2 Gene:CG10950 / 36942 FlyBaseID:FBgn0034205 Length:586 Species:Drosophila melanogaster


Alignment Length:686 Identity:122/686 - (17%)
Similarity:257/686 - (37%) Gaps:185/686 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NSQNQAITHEWLTDAEASPQAWQFSWQLMQLGKSQEVQF--FGAITLHSKLMKHWHEVPPENREE 82
            :|.|.::.:|:|...:.|...|..:.:::......::..  |.|::|..|:...::.:.......
  Fly    18 SSGNISLANEYLAAFQKSNDTWIIAEEILSYRPPHDMHILTFAAMSLAKKIKTSFYSLQKFQLMS 82

  Fly    83 LKQKILESIVRFAG---GPKIVLNRLCISLGAYIVHMLGEWPGAIEEVINTFQNQRMPNVSADVQ 144
            ||..:::.: ::|.   ....::.:|.:.:.| :..|..:|...:::.:.        .:|.:.|
  Fly    83 LKNSLIDHL-KYAAMMRDSNSLIVQLAVGISA-LGLMFSQWDYELQDFVR--------KLSENPQ 137

  Fly   145 -LWIMLEVLTAIPEEAQVIHTSVKRVVLRAEIAKRVQLVIHTVERYLKLQMNRVWDAEAYSNMNR 208
             :..:||||..||||.:..:..|:        ||::..||.|:|:    |...:.|         
  Fly   138 YVMALLEVLKVIPEETRPSNLPVE--------AKKLNSVIDTLEQ----QSPYILD--------- 181

  Fly   209 AVKCVGTWIKNIGYTIEGCVTITAVLLEVVHKCYWPCIHAGDGCMTADENELAESCLKTMVNIII 273
                          .:||.:....:..:.:.||...|.......|.:.:..|..........|:.
  Fly   182 --------------VLEGLLQRPDLPDDALPKCLAVCASWTKFSMLSPDQVLQRKLFIMAEFILA 232

  Fly   274 QPDCHNYPKTAFVLIKMFLDSL--SEIT----------KTEWKRENDNEDIIVHIYMLFVSSVER 326
            .|..:.:.:.|.:.:.:...||  .|:.          |..:||......::.:...:||:..:.
  Fly   233 TPLVNGHLEAAELFVALLEQSLIRKELNSCLANSVICLKPAFKRSMGERSLLQNYCNIFVNLFQT 297

  Fly   327 HSTLLLSGITSADPELSILVHRIV--QEILHCTDKPGIYPVEESCSTMALAFWYMLQDEVFAMSN 389
            |..|     |..:||.  |..|:|  :.:|...::..:..:|.|     |..|..:.:||: :.:
  Fly   298 HFRL-----TQTNPER--LNERLVTIELLLLVAEESPLEVIEAS-----LGMWSSISEEVY-LHD 349

  Fly   390 DEQKHKCWEYIKPLYAHLTRILVRKSEQP-DEKSLAKWSSDDLECFRCYRQDISDTFMYCYDVLN 453
            |.:.:..::   |.:..|..:|:.::..| :.:.:....|.|::.||              :::.
  Fly   350 DPEMYSVYQ---PYFVRLLDLLLPRAALPANYEFMMPPGSADMQRFR--------------ELIG 397

  Fly   454 DYILEILAAMLDE--------AIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQIPRLMRVL 510
            :.:|: :|.|:|:        .:.|.|   :.|.::||.::..:.:..:|...:...|..:::..
  Fly   398 EVLLD-MAHMIDDDTVEKLCSIVVDEQ---SPWMEVEASVFFLRHLIGNFKEHQTDIISCILKTF 458

  Fly   511 ----AEIPYEKLNVKLLGTALETMGSYCNWLMENPAYIPPAINLLVRGLNSSMSAQATLGLKELC 571
                .:.|:.:|.|      ||.:.            ||..:::                  |..
  Fly   459 FQKDCQQPFIRLQV------LELIS------------IPEIVSV------------------ETI 487

  Fly   572 RDCQLQLKPYADPLLNACHASLNTGR-----------------MKNSDSVRLMFSIGKLMSLLRP 619
            .||.:.....|||:|:|....||...                 :|.|:...|:.||   .:|:| 
  Fly   488 WDCLVNELRRADPMLSAIDCRLNLLMPHWNYLVTLAIMVDEFCLKESERCELLCSI---CTLIR- 548

  Fly   620 EEIPKYLDIIVSPCFEELQAICQADSKTPAARIRTI 655
                            ||.|.|..::||....||.|
  Fly   549 ----------------ELPAACVQEAKTSILNIRWI 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdmNP_001262696.1 IBN_N 28..92 CDD:281761 10/65 (15%)
Xpo1 98..>217 CDD:285575 23/119 (19%)
CG10950NP_611200.2 IBN_N 25..91 CDD:197981 10/65 (15%)
Xpo1 103..>207 CDD:285575 28/147 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441202
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004114
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12363
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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