Protein Alignment cdm and Tnpo-SR

DIOPT Version :9

• Sequence 1: NP_001262696.1
• Gene: cdm / 42171
• FlyBaseID: FBgn0261532
• Length: 971
• Species: Drosophila melanogaster
• Sequence 2: NP_001259961.1
• Gene: Tnpo-SR / 33465
• FlyBaseID: FBgn0031456
• Length: 932
• Species: Drosophila melanogaster
• Alignment Length: 912
• Identity: 177/912 - (19%)
• Similarity: 382/912 - (41%)
• Gaps: 131/912 - (14%)

  Fly     1 MEPIDIARLEEAVVSFYRSNS-QNQAITHEWLTDAEASPQAWQFSWQLMQLGKSQEVQFFGAITL 64
            |:...:..:.:|:.:.::.|: :.|...::||.|.:.|..:|..:.:|:...:.....:|.|.|:
  Fly     1 MDTYSVDVVYQAISALFQGNNPKEQEKANKWLQDFQKSIYSWTIADELLHQKRDLHANYFAAQTM 65

  Fly    65 HSKLMKHWHEVPPENREELKQKILESIVRF-AGGPKIVLNRLCISLGAYIVHMLGEWPGAIEEVI 128
            .:|:...:.|:||...|.|:..::..|.:. .....:::.:|.::: |.:..::..|...|.:::
  Fly    66 RNKIQNSFSELPPHTHESLRDSLITHIGQIDEQTDNVIVTQLSLAV-ADLALLMASWREPINDLL 129

  Fly   129 NTFQNQRMPNVSADVQLWIMLEVLTAIPEE--AQVIHTSVKRVVLRAEIAKRVQLVIHTVERYL- 190
            .|.    .|:..|   :|.:||||..:|||  ::.:.....|   |.|:.|::......|.::|
  Fly   130 VTL----APHQCA---IWPLLEVLKVLPEEIDSRYLRLGANR---REEVHKQLDASAECVLKFLC 184

  Fly   191 ------KLQMNRVWDAEAYSNMNRAVKCVGTWIKNIGYTIEGCVTITAVLLEVVHKCYWPCIHAG 249
                  .|...|||        |.|::....|:                   |:|.  :|..|..
  Fly   185 MCLQREDLDQQRVW--------NAALRTYSAWL-------------------VIHA--FPVSHVY 220

  Fly   250 DGCMT-------------ADENELAESCLKTMVNII-IQPDCHNYPKTAFVLIKMFLDSLSEITK 300
            :..:|             ...::.|..|:..:::.| .:.|..:.|:::|. .::|.......|.
  Fly   221 NNALTQLAFRLLSLPETSGKLHDNATECVCALLSCINTRQDGASDPESSFE-AQLFGAVCMLETP 284

  Fly   301 TEWKRENDNEDIIVHIYMLFVSSVERHSTLLLSGITSADPELSILVHRIVQEILHCTDKPGIYPV 365
            ......:::.|..::...:|.|..:.....||:  .:..|..|:   :.:..:|.|.   |.:..
  Fly   285 YHLSVAHEDTDKTINYCRIFTSLCDAFFYDLLA--DAQKPHYSL---KGLDLVLLCV---GHFDY 341

  Fly   366 EESCSTMALAFWYMLQDEVFAMSNDEQKHKCWEYIKPLYAHLTRILVRKSE-QPDEKSLAKWSSD 429
            |.:..|..|  ||.|.:::|..:.|    |.....:|....|...|.|.|: :.|...|.:.:::
  Fly   342 EVAEITFHL--WYKLSEDLFQRNED----KLTVLFRPHIERLISALFRHSQMESDHDGLIEENNN 400

  Fly   430 DLECFRCYRQDISDTFMYCYDVLNDYILEI-LAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAE 493
                |..:|:.:|       |::.|....: ..|...:....||...|.|...||.::..|:||:
  Fly   401 ----FFDFRRKVS-------DLIKDVAFIVGSGACFKQMFHILQAPETTWESTEAALFIMQNVAK 454

  Fly   494 HFGGEEKRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMENPAYIPPAINLLVRGL--N 556
            :...:|...||:::..:..:. |:.::.:..||:..:|..|:|:..:|..:...:|.|:..|  .
  Fly   455 NILPDENEVIPKVVEAILNMS-EQTHIAVRYTAILLIGELCDWIENHPESLEAVLNFLLYALQQK 518

  Fly   557 SSMSAQATLGLKELCRDCQLQLKPYADPLLNACH--------ASLNTGRMKNSDSVRLMFSIGKL 613
            :.::..|.:.|..:|..|:.::         .||        .||::.::.|..::.|:..|..:
  Fly   519 NGLAPAAAIALTSICSACRQKM---------VCHISGLVEIARSLDSFQINNDVAIGLLKGISLI 574

  Fly   614 MSLLRPEEIPKYLDIIVSPCFEELQAICQADSKTPAARIRT--IFRLNMISTLFSSLNTDVDEQA 676
            ::.|..|::...|..||....:.|..:..:...||....||  ::.::....:....|.||.:.
  Fly   575 LTRLPREQLQPALREIVGFQLQPLAQLVDSTGSTPQKGERTDPVYWIDRACAIIRHTNPDVPDN- 638

  Fly   677 TDQPIVQPVLLVMQRTMPIFKRIAEMWVEEIDVLEAACSAMKHAITNLRSSFQPMLQDLC--LFI 739
                :..|.:.::.....:..|:.:.:..::.::|..|..:::.|..:|.....:::.|.  :.:
  Fly   639 ----VEHPTVAILNDAWQLISRVMDKYQSDLRIMERTCRLIRYGIRMVRKQAMMLVEPLIKQMVV 699

  Fly   740 VASFQTRCCAPTLEISKTAIVMFFKDEGCKPLMQQLLREFIQHSFKLFESTPEQNFSNISDTMET 804
            :.|.|...|  .|.:....:..|.|...|...:.::|:.||:.:|.|.:.  |....|..||::.
  Fly   700 LYSVQHHSC--FLYVGSILVDEFAKSSECIGGLLEMLQAFIEPTFGLLQM--ENGLKNNPDTVDD 760

  Fly   805 FFGCLTQIIKKIPQVLEDKTLAYDRLVFY-AQRGMTLPESGAIRNSIQFLTHFVM--QSRNHAHV 866
            ||...::.:...|..|...:|...  :|. |....:|....|..:.::|..:.::  :|.||:..
  Fly   761 FFRLASRYLDCCPHQLLQSSLITP--IFQCALIACSLDHREANSSVMKFFINLLVWGRSNNHSRN 823

  Fly   867 TE 868
            ||
  Fly   824 TE 825

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cdm	NP_001262696.1	IBN_N	28..92	CDD:281761	15/63 (24%)
		Xpo1	98..>217	CDD:285575	27/127 (21%)
Tnpo-SR	NP_001259961.1	IBN_N	28..94	CDD:281761	16/65 (25%)
		Xpo1	100..248	CDD:285575	34/187 (18%)
		HEAT repeat	427..454	CDD:293787	8/26 (31%)
		HEAT repeat	462..496	CDD:293787	7/34 (21%)
		HEAT repeat	506..531	CDD:293787	5/24 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441203
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR12363
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940