Protein Alignment cdm and ipo13b

DIOPT Version :10

• Sequence 1: NP_650682.1
• Gene: cdm / 42171
• FlyBaseID: FBgn0261532
• Length: 971
• Species: Drosophila melanogaster
• Sequence 2: XP_002665826.2
• Gene: ipo13b / 100319138
• ZFINID: ZDB-GENE-070706-1
• Length: 953
• Species: Danio rerio
• Alignment Length: 982
• Identity: 269/982 - (27%)
• Similarity: 490/982 - (49%)
• Gaps: 69/982 - (7%)

  Fly     6 IARLEEAVVS-FYRSNSQNQAITHEWLTDAEASPQAWQFSWQLMQLGKSQEVQFFGAITLHSKLM 69
            :..:|:|:.. :|..|.:|:.:..:||..|:.|||||||.|.|::..|..|:|:|||..||:|:.
Zfish    11 VENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWQFCWVLLRPDKVPEIQYFGASALHTKIS 75

  Fly    70 KHWHEVPPENREELKQKILESIVRFAGGPKIVLNRLCISLGAYIVHMLGE-WPGAIEEVINTFQN 133
            ::|.::|.|..:.||.::...|.|||.|.||||.|||::|.:..::|:.| ||||:.|::..||.
Zfish    76 RYWSDIPAEQYDSLKSQLFSQIARFASGSKIVLTRLCVALASLALNMMPEAWPGAVSEMVRMFQE 140

  Fly   134 QRMPNVSADVQLWIMLEVLTAIPEEAQVIH-TSVKRVVLRAEIAKRVQLVIHTVERYLKLQMNRV 197
            .. .:|....:...:||:||.:|||.|... ...::..:|..:......|...::     |:.|.
Zfish   141 DG-GDVDGRARCLALLELLTVLPEEFQTSRLPQYRKGQVRGALGSEWTAVYPLLQ-----QLLRQ 199

  Fly   198 WDAEAYSNMNRAVKCVGTWIKNIGYTIEGCVTITAVLLEVVHKCYWPCIHAGDGCMTAD-----E 257
            .|:.:.... |.:||:.:|                |||:|.       ::..:|.:.|.     :
Zfish   200 PDSPSLVKA-RVLKCLSSW----------------VLLDVP-------LNESEGLVEASFTALAD 240

  Fly   258 NELAESCLKTMVNIIIQPDCHNYPKTAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVS 322
            .||.::.::.:||.|.|||...|..|...|:...|....::....   :|.:.:....|..:.||
Zfish   241 PELFDTAVEAIVNTISQPDSQRYVNTLLKLVPQVLQLQEQLRDAV---QNGDMETSHGICRIAVS 302

  Fly   323 SVERHSTLLLSGITSADPELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMLQDEVFAM 387
            ..|.||..||..:......|:     :|..|:.||..||.|||.|:.|::.|.|||.|||::  |
Zfish   303 LGENHSRALLEQVEHWQSFLA-----LVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDI--M 360

  Fly   388 SNDEQKHKCW-EYIKPLYAHLTRILVRKSEQPDEKSLAKWSSDDLECFRCYRQDISDTFMYCYDV 451
            |.:.:|...: :..:|:|..|..:|:.|::.|.::..|.||||:.|.||.||.|||||.||.|::
Zfish   361 SFEAEKQAVYLQVYRPVYFQLVDVLLHKAQFPTDEEYASWSSDEKEQFRIYRVDISDTLMYVYEM 425

  Fly   452 LNDYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQIPRLMRVLAEIPYE 516
            |...:|..|...|...:.:.:: .|.|...||.:|.|||:||.........||.|:.::..|...
Zfish   426 LGAELLSNLYDKLGRLLTNTEQ-TTTWQHTEALLYGFQSIAETIDVNYSDVIPGLIGLIPRININ 489

  Fly   517 KLNVKLLGTALETMGSYCNWLMENPAYIPPAINLLVRGL-NSSMSAQATLGLKELCRDCQLQLKP 580
              ||:|..|.:.|:|:...||.::|..:...:.|:::.| |..:|..:...||::||:|:..|.|
Zfish   490 --NVQLADTVMFTIGALAEWLADHPVMLSSVLPLVLQALGNPDLSVSSVSTLKKICRECKYDLPP 552

  Fly   581 YADPLLNACHASLNTGRMKNSDSVRLMFSIGKLMSLLRPEEIPKYLDIIVSPCFEELQAICQADS 645
            ||..::......|.....|.|..:.||.::|.|:|.|..|||.:.|..:::|..::|:.:.: ::
Zfish   553 YATNIVAVSQEVLIKQIHKTSQCMWLMQALGFLLSALPVEEILRNLHSLITPYIQQLEKLAE-ET 616

  Fly   646 KTPAARIRTIFRLNMISTLFSSLN--TDVDEQATDQPIVQ---------PVLLVMQRTMPIFKRI 699
            ..|:.::..|..|.::|.||::|:  ...||...:.|.::         ||::|:|:...:.:.:
Zfish   617 PNPSNKLAIIHILGLLSNLFTTLDITKQEDESGENAPPIKSAPPPTGPNPVVVVLQQVFALIQTV 681

  Fly   700 AEMWVEEIDVLEAACSAMKHAITNLRSSFQPMLQDLCLFIVASFQTRCCAPTLEISKTAIVMFFK 764
            ...|:.:..|:||.|:..:.::..|...|.||:..|...:...:.|...|..|::::..:.:|..
Zfish   682 LSKWLNDSQVVEAVCAIFEKSVKTLLHDFAPMVSQLSEMLGQMYSTIPQASALDLTRQMVHIFAS 746

  Fly   765 DEGCKPLMQQLLREFIQHSFKLFESTPEQNFSNISDTMETFFGCLTQIIKKIPQVLEDKTLAYDR 829
            :....|.::.|.......:..:|:..|..:    .|.:::|.....|.:|:.|.:...:.|....
Zfish   747 ETNHFPPIKALFELVTSVTLTIFQQGPRDH----PDIVDSFMQLQAQALKRKPDLFLSENLDVKA 807

  Fly   830 LVFYAQRGMTLPESGAIRNSIQFLTHFVMQSRNHAHVTEVVLATGEQTLYTAMMCVGYLTPRSQV 894
            :.......:..||:..::::..|.:..:....:...:..||...|:..|...:..:|..:.||.:
Zfish   808 VFHCGVLSLKFPEAPTVKSTCLFFSELIPHCADIPPLARVVQEDGKLLLVAVLEAIGGQSSRSLM 872

  Fly   895 DKFADILLAMNRKYAAEMAVWMKSLMSTPNFPTQLITDADKTRYTALIIKEKVNKRLLQQHLSEM 959
            |:||::|..:|:.....:.||:|..:.:|.||:..::|..|..::..:::|:||||.::..:.|.
Zfish   873 DQFAEVLFCLNKHCFTLLTVWLKEALRSPGFPSSRVSDEQKNTFSQQVLRERVNKRRVKDIVKEF 937

  Fly   960 AMKTRGL 966
            .:..|||
Zfish   938 TLVCRGL 944

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cdm	NP_650682.1	IBN_N	29..93	CDD:197981	27/63 (43%)
		Xpo1	98..>220	CDD:462459	35/123 (28%)
		Importin_rep	418..454	CDD:436727	20/35 (57%)
		Importin_rep_3	838..912	CDD:465873	15/73 (21%)
ipo13b	XP_002665826.2	CRM1	8..>638	CDD:227432	205/670 (31%)
		IBN_N	33..99	CDD:197981	27/65 (42%)
		Importin_rep	390..429	CDD:436727	20/38 (53%)
		Importin_rep_2	572..615	CDD:408557	13/43 (30%)
		Importin_rep_3	816..890	CDD:465873	15/73 (21%)