DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrd and AT3G54930

DIOPT Version :10

Sequence 1:NP_732295.1 Gene:wrd / 42169 FlyBaseID:FBgn0042693 Length:984 Species:Drosophila melanogaster
Sequence 2:NP_191053.1 Gene:AT3G54930 / 824658 AraportID:AT3G54930 Length:497 Species:Arabidopsis thaliana


Alignment Length:69 Identity:17/69 - (24%)
Similarity:28/69 - (40%) Gaps:27/69 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SPL--VSFLTFLLAILALVTSGNDLKDTPKTPEELLSFMQARGFM---QIDEIID-VKSCISFK- 59
            :||  .|.:||.|.:                  .:::|....|||   .||.::: ::.|.|.| 
plant    92 NPLHYTSIMTFKLQL------------------NIVTFCWISGFMLALVIDIVLNQLEFCHSNKI 138

  Fly    60 --FY 61
              ||
plant   139 NHFY 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrdNP_732295.1 B56 475..875 CDD:460264
AT3G54930NP_191053.1 B56 37..>97 CDD:474937 2/4 (50%)
B56 86..492 CDD:460264 17/69 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.