DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrd and pptr-2

DIOPT Version :9

Sequence 1:NP_732295.1 Gene:wrd / 42169 FlyBaseID:FBgn0042693 Length:984 Species:Drosophila melanogaster
Sequence 2:NP_001122845.1 Gene:pptr-2 / 179526 WormBaseID:WBGene00007554 Length:607 Species:Caenorhabditis elegans


Alignment Length:641 Identity:340/641 - (53%)
Similarity:426/641 - (66%) Gaps:87/641 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 SAATAVAAVPT--TSDV-----PAEEMRPTVAQNLVGGISISLGIGQRNG-GAAPASSAVMVTPN 405
            :.::..:.:||  |.||     ||:...||             .||:.|. |..|      |.|.
 Worm    31 AGSSKASTIPTIRTEDVGGDMIPADAPPPT-------------NIGRTNTYGGGP------VIPR 76

  Fly   406 ATMVVTTSSLSIRQNGDILPGHPAGLQPSPQTLQQLTGSPGRARDRNLFYTPPTASVAMALPALR 470
            .....::|..:|.||.::                                        ..|||::
 Worm    77 RERRQSSSMFNISQNREL----------------------------------------QRLPAIK 101

  Fly   471 ETAASEREELFIQKIQQCCTLFDF-SEPLSDLKFKEVKRAALHEMVDFLTN-QNGVITEVIYPEA 533
            :...||||.|||||::|||.:||| ::.||||||||||||||:|:||.::. ..|.:::.:||||
 Worm   102 DADPSERETLFIQKLRQCCVVFDFANDALSDLKFKEVKRAALNELVDHVSGAPKGSLSDAVYPEA 166

  Fly   534 INMFAVNLFRTLPPSSNPNGAEFDPEEDEPTLESSWPHLQLVYELFLRFLESPDFQPSMAKRFID 598
            |.||:.||||.|.|.:||.||||||:|||||||::|||||||||.||||||.||||..:|||:||
 Worm   167 IGMFSTNLFRPLSPPTNPIGAEFDPDEDEPTLEAAWPHLQLVYEFFLRFLECPDFQSQVAKRYID 231

  Fly   599 HQFVLQLLDLFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNVFYRFIYETEHHNGIAELL 663
            ..|:|:||.:.|||||||||||||.||||||||||.||:|||||||:||.||||||.||||||||
 Worm   232 QNFILRLLMIMDSEDPRERDFLKTTLHRIYGKFLGHRAYIRKQINNIFYSFIYETERHNGIAELL 296

  Fly   664 EILGSIINGFALPLKEEHKQFLLKVLLPLHKAKSLSVYHPQLTYCVVQFLEKDPSLSEAVIKSLL 728
            |||||||||||||||||||.|||:|||||||.||||||||||.||||||:|||.||:|.||..:|
 Worm   297 EILGSIINGFALPLKEEHKTFLLRVLLPLHKVKSLSVYHPQLAYCVVQFIEKDSSLTEPVISGML 361

  Fly   729 KFWPKTHSPKEVMFLNELEELLDVIEPAEFQKVMVPLFRQIAKCVSSPHFQVAERALYYWNNEYI 793
            :||||.||||||||||||||:||||||.||||:|.|||.|||:|||||||||||||||||||||:
 Worm   362 RFWPKQHSPKEVMFLNELEEVLDVIEPNEFQKIMTPLFSQIARCVSSPHFQVAERALYYWNNEYV 426

  Fly   794 MSLITDNSAVILPIMFPALNRNSKTHWNKTIHGLIYNALKLFMEIDQRLFDECSKNYKQEKQMER 858
            |||:.||:.||:|||||.|.:|||:|||||||||||||||:|||::|:||||||:.|::::..|:
 Worm   427 MSLVADNARVIIPIMFPVLFKNSKSHWNKTIHGLIYNALKMFMEMNQKLFDECSQAYQKDRVQEK 491

  Fly   859 EKLSQREELWQQVESLAKTNPEWTKAR----RFNDCLPVSDSRALCDQYSENSDSAYDQSEQRAR 919
            ....::|.:|..:|..|..||::.:.:    |||....:|..:.  :...||..::...|:....
 Worm   492 TLNEEKERIWNNIEKQAMGNPQYVEVKALFARFNPDEIISSRQQ--NGVDENMKTSTVLSKDEIL 554

  Fly   920 QPPPPLPPQKQAHQEPREIRGERNKDKPLLRRKSDLPSDSGTVKALNEHKRTDEYL 975
            :....:...|            .:.|.....::||.|.|..|.:||.|:||.|.:|
 Worm   555 KNAVGVSSMK------------NDMDFGPNHKQSDFPPDEQTTRALGEYKRHDPFL 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrdNP_732295.1 B56 474..875 CDD:279883 293/402 (73%)
PLN00122 <780..879 CDD:215064 60/98 (61%)
pptr-2NP_001122845.1 B56 105..508 CDD:279883 293/402 (73%)
PLN00122 <413..508 CDD:215064 59/94 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165252
Domainoid 1 1.000 627 1.000 Domainoid score I84
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37661
Inparanoid 1 1.050 642 1.000 Inparanoid score I439
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D345293at33208
OrthoFinder 1 1.000 - - FOG0000226
OrthoInspector 1 1.000 - - oto18153
orthoMCL 1 0.900 - - OOG6_100293
Panther 1 1.100 - - LDO PTHR10257
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3
SonicParanoid 1 1.000 - - X167
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.930

Return to query results.
Submit another query.