DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrd and ppp2r5b

DIOPT Version :9

Sequence 1:NP_732295.1 Gene:wrd / 42169 FlyBaseID:FBgn0042693 Length:984 Species:Drosophila melanogaster
Sequence 2:NP_001093749.1 Gene:ppp2r5b / 100101792 XenbaseID:XB-GENE-490177 Length:491 Species:Xenopus tropicalis


Alignment Length:505 Identity:285/505 - (56%)
Similarity:367/505 - (72%) Gaps:38/505 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 ILPGHPA--GLQP----------SPQTLQQL------TGSPGRARDRNLFYTPPTASVAMALPAL 469
            :.|..|:  ||.|          |.::|::.      :.|..|.:.:....||        ||.|
 Frog     7 VTPTSPSSPGLSPVLAADKVDGFSRRSLRRSRQRRSHSSSQFRYQSKQQELTP--------LPPL 63

  Fly   470 RETAASEREELFIQKIQQCCTLFDFSEPLSDLKFKEVKRAALHEMVDFLTNQNGVITEVIYPEAI 534
            ::...||..:||.:|:|||..:|.|.:.::|||.||:|||||:|:|:.:....||:.|.:|||.|
 Frog    64 KDAPVSELHDLFCKKLQQCSVIFQFMDCVADLKGKEIKRAALNELVECIATNRGVLIEPVYPEVI 128

  Fly   535 NMFAVNLFRTLPPSSNPNGAEFDPEEDEPTLESSWPHLQLVYELFLRFLESPDFQPSMAKRFIDH 599
            .|.:||:||||||:.||   |||||||||..|.||||||||||.|||||||.|||||:|||::|.
 Frog   129 KMISVNIFRTLPPTDNP---EFDPEEDEPNFEPSWPHLQLVYEFFLRFLESQDFQPSLAKRYVDQ 190

  Fly   600 QFVLQLLDLFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNVFYRFIYETEHHNGIAELLE 664
            :|||.||:||||||||||::|||:|||:|||||||||:||||.||:|.|||||||..||:|||||
 Frog   191 KFVLMLLELFDSEDPREREYLKTILHRVYGKFLGLRAYIRKQCNNIFLRFIYETERFNGVAELLE 255

  Fly   665 ILGSIINGFALPLKEEHKQFLLKVLLPLHKAKSLSVYHPQLTYCVVQFLEKDPSLSEAVIKSLLK 729
            ||||||||||||||.||||||::||:|||.|||||::|.||.||.|||||||.||:|.||:.|||
 Frog   256 ILGSIINGFALPLKSEHKQFLVRVLIPLHSAKSLSIFHAQLAYCAVQFLEKDSSLTEHVIRGLLK 320

  Fly   730 FWPKTHSPKEVMFLNELEELLDVIEPAEFQKVMVPLFRQIAKCVSSPHFQVAERALYYWNNEYIM 794
            :||||.:.||||||.||||:||||||::|.|:..|||:|||:|||||||||||||||:||||||:
 Frog   321 YWPKTCTQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIARCVSSPHFQVAERALYFWNNEYIL 385

  Fly   795 SLITDNSAVILPIMFPALNRNSKTHWNKTIHGLIYNALKLFMEIDQRLFDECSKNYKQEKQMERE 859
            |||.:|...|||::|..|.:.||.|||:||..||||.||.|||::.:||||.:.:||.::|.|.:
 Frog   386 SLIEENCHTILPLIFGTLYQVSKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASYKLDRQQEMK 450

  Fly   860 KLSQREELWQQVESLAKTNPEWTKARRFNDCLPVSDSRALCDQYSENSDS 909
            :..:|:|||::::.|        :.::.|. |..:....|..|:|..|.|
 Frog   451 REKERQELWRKLDDL--------RLKKMNG-LEEAQMNQLNLQHSRGSKS 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrdNP_732295.1 B56 474..875 CDD:279883 263/400 (66%)
PLN00122 <780..879 CDD:215064 51/98 (52%)
ppp2r5bNP_001093749.1 B56 67..465 CDD:366725 263/400 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D345293at33208
OrthoFinder 1 1.000 - - FOG0000226
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3
SonicParanoid 1 1.000 - - X167
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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