DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbp20 and ncbp-2

DIOPT Version :10

Sequence 1:NP_524396.1 Gene:Cbp20 / 42166 FlyBaseID:FBgn0022943 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001370288.1 Gene:ncbp-2 / 184953 WormBaseID:WBGene00009141 Length:158 Species:Caenorhabditis elegans


Alignment Length:141 Identity:94/141 - (66%)
Similarity:120/141 - (85%) Gaps:0/141 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ELSSYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDKYKKTP 70
            |:|:||||.::|:..:||.:||.||||||||||:||.|:|::|||.|.||||.::||||::||||
 Worm    13 EISAYRDQRYQGTVRDQETALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTP 77

  Fly    71 CGFCFVEYYVRSEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVRDEYRTDYDAG 135
            |||||||||.|.:||.|::.::.||:|||:||.||||||:|||||||||.|||||||||.|||..
 Worm    78 CGFCFVEYYTREDAELALQNISNTRMDDRVIRADWDAGFIEGRQYGRGKHGGQVRDEYRKDYDPE 142

  Fly   136 RGGYGKLLSQK 146
            ||||.:.::||
 Worm   143 RGGYNRAIAQK 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cbp20NP_524396.1 RRM_NCBP2 32..109 CDD:409686 51/76 (67%)
ncbp-2NP_001370288.1 RRM_NCBP2 39..116 CDD:409686 51/76 (67%)

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