DRSC/TRiP Functional Genomics Resources

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Protein Alignment sr and klf11a

DIOPT Version :9

Sequence 1:NP_001262693.1 Gene:sr / 42162 FlyBaseID:FBgn0003499 Length:1271 Species:Drosophila melanogaster
Sequence 2:XP_021324131.1 Gene:klf11a / 560787 ZFINID:ZDB-GENE-030131-3568 Length:479 Species:Danio rerio


Alignment Length:493 Identity:114/493 - (23%)
Similarity:165/493 - (33%) Gaps:155/493 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   705 QHQQSQQQASKISYRGIFTTTGNAMNAAAAAAAAA--AQQQHQQQQQHQQQLPSPQLGVLAGPMS 767
            :|...:..:|...|        |.:.||.|....:  .|:.|:.:                 |::
Zfish    25 RHDSEKSCSSTPEY--------NDLEAAEALVCMSFWVQRTHKPR-----------------PLT 64

  Fly   768 PPSNSLGNSWGLPSPDKTMFQPPLFSLPAHYATMQQQQQQQQQQQQQQQQQQAA---------GA 823
            |.|:|.         |....||.|...|....::..............:....|         |.
Zfish    65 PTSDSC---------DSLALQPELIESPKDLVSLSSLCMTPPHSPSFAETSGTAVLSTSVACSGL 120

  Fly   824 APSPYDDGRAAAAAAAQHAELLGLTMDCTPLLLKQPP-----PSYAGASAGFPGLGDLHSSH--- 880
            .|.|    |..:|...:.|..:.|....|.||...||     ||...|::......|....|   
Zfish   121 KPHP----RLCSALTNRAACHVSLHPSTTVLLNPAPPQTAEQPSLRRATSVIRHTADRSMDHNIP 181

  Fly   881 EQQLQQQQYVRSQ--PKY-----------QWLDSPADYAQQQQQVQQVQQQQQQQQTLVLPGPTS 932
            .....|::...|:  |::           |...||.|.|:.::               ..|.|.|
Zfish   182 STTTGQEKPCSSEIPPEHTESNTSLKGEVQICSSPCDSAEPER---------------TAPSPDS 231

  Fly   933 SASSSNAALGVLIPKQENYPDMQPSS-----------NG-TGYSGG---------SGGS------ 970
            :        |:.||..::.....|.|           || ||....         :.||      
Zfish   232 T--------GIAIPTSQSTIPQSPMSSPPVLCQVFPVNGQTGIISAFVQTPVQMQTSGSKPILPH 288

  Fly   971 SAAAAAAAAAAAAAVQLAEYSPSTSKGHEILSQVYQQSTVPL---KLVPVKPRKYPNRPSKTPVH 1032
            |......:..|...|.........|:     |...|||.|.|   ||:|:.|         .||:
Zfish   289 SQPLLVGSPVAQGTVMFVVPQSQVSQ-----SSTCQQSVVTLGNTKLLPLAP---------APVY 339

  Fly  1033 ----------------ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSD 1079
                            .|.|.|..:.|.:.:.:|..|..|:|.|||:|||.|..  |.:.|:|||
Zfish   340 VPSGQSSGVTQSDFSRRRNYVCNFQGCKKTYFKSSHLKAHLRTHTGEKPFSCHWEGCDKKFARSD 404

  Fly  1080 HLTTHIRTHTGEKPFSCDICGRKFARSDEKKRHAKVHL 1117
            .|:.|.|||||||.|.|.:|.|:|.|||...:||:.|:
Zfish   405 ELSRHRRTHTGEKKFVCPVCERRFMRSDHLTKHARRHM 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srNP_001262693.1 zf-C2H2 1036..1060 CDD:278523 7/23 (30%)
C2H2 Zn finger 1038..1060 CDD:275368 6/21 (29%)
zf-H2C2_2 1052..1077 CDD:290200 12/26 (46%)
C2H2 Zn finger 1068..1088 CDD:275368 9/21 (43%)
zf-H2C2_2 1080..1105 CDD:290200 14/24 (58%)
C2H2 Zn finger 1096..1116 CDD:275368 9/19 (47%)
klf11aXP_021324131.1 MotB_plug <203..345 CDD:330912 35/178 (20%)
C2H2 Zn finger 361..383 CDD:275368 6/21 (29%)
zf-H2C2_2 375..402 CDD:316026 12/26 (46%)
C2H2 Zn finger 391..413 CDD:275368 9/21 (43%)
zf-H2C2_2 405..428 CDD:316026 13/22 (59%)
zf-C2H2 419..441 CDD:306579 10/21 (48%)
C2H2 Zn finger 421..441 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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