Protein Alignment sr and cbt

DIOPT Version :10

• Sequence 1: NP_001262693.1
• Gene: sr / 42162
• FlyBaseID: FBgn0003499
• Length: 1271
• Species: Drosophila melanogaster
• Sequence 2: NP_722636.1
• Gene: cbt / 33224
• FlyBaseID: FBgn0043364
• Length: 428
• Species: Drosophila melanogaster
• Alignment Length: 527
• Identity: 116/527 - (22%)
• Similarity: 173/527 - (32%)
• Gaps: 177/527 - (33%)

  Fly   779 LPSPDKTMFQPPLFSLPAHYATMQQQQQQQQ------QQQQQQQQQQAAGAAPSPYDDGRAAAAA 837
            ||||..|   |||...........:||..:.      :...|:.|:......|:|.|....|...
  Fly     7 LPSPPAT---PPLRENKLEIVAKDEQQVNENLLKAKLKLVAQKSQKNGGIITPNPSDTEDEAPEI 68

  Fly   838 AAQHAELLGLTMDCTPLLLKQPPPSYAGASAGFPGLGDLHSSHEQQLQQQQYVRSQPKYQWLDSP 902
            |..:               |:|                       :|:|.....:.|..|.||..
  Fly    69 AVPN---------------KKP-----------------------RLEQPAMSMTPPPDQKLDDD 95

  Fly   903 ADYAQQQQQVQ---------QVQQQQQQQQTLVLPGPTSSASSSNAALGVLIPK-QENYPD---- 953
                |:.::|.         .|....|.:.:.......||:|::|.:...:.|. :::||:
  Fly    96 ----QKAERVSVIMRVNSSGAVSSSSQDENSSSSTSCCSSSSNTNTSTSSVPPTVEDDYPEANVW 156

  Fly   954 ----------------MQPSSNGTGYSGGSGGSSAAAAAAAAAAAAAVQLAEYSPSTSKGHEILS 1002
                            :.|..        :..:..|......|.|..::..|..|       ||:
  Fly   157 RNLKFKMNRKRAAEVALPPVQ--------TPETPVAKLVTPPAPAECIKEEEIKP-------ILT 206

  Fly  1003 QVY-------------------QQSTVPLKLVP-VKPRKYPNR---PSKTPVHERPYACPVENCD 1044
            .:|                   |||..|:...| :...|...|   ........|.|.|...:|.
  Fly   207 PIYVSPVASSASQLILLSTVAAQQSPTPVPKTPTMSEEKLTTRITAAQAAATRSRIYECSFPDCG 271

  Fly  1045 RRFSRSDELTRHIRIHTGQKPFQCR--ICMRSFSRSDHLTTHIRTHTGEKPFSCDICGRKFARSD 1107
            :.:.:|..|..|.|:|||::||.|:  .|.:.|||||.|:.|.|||||||.|.|.:|.:||.|||
  Fly   272 KNYFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSD 336

  Fly  1108 EKKRHAKVHLKQRIKKEKVRGEQQQQQQQQQQQQQQQQQQQLQQQQEQHHLSLQQHQQYQQ---- 1168
            ...:|.|.|     .|:|..|..:                         |:||..:.....
  Fly   337 HLSKHVKRH-----NKDKANGVNR-------------------------HVSLANNNTSASVAAS 371

  Fly  1169 --HHLLHSADLAIVTSSASMXRLENSASSVDQAQTPTPTPAPAATQKVSLALALDLDESAFPFEL 1231
              ...||...:|...||||. .:.:::..|..||.               .|.|....|:|.|.
  Fly   372 LCDASLHLRAIAPAGSSASSSPISSASLQVYSAQD---------------LLRLQQQASSFTFG- 420

  Fly  1232 TSDYGTL 1238
                |||
  Fly   421 ----GTL 423

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sr	NP_001262693.1	zf-C2H2	1036..1060	CDD:395048	7/23 (30%)
		C2H2 Zn finger	1038..1060	CDD:275368	6/21 (29%)
		zf-H2C2_2	1052..1077	CDD:463886	11/26 (42%)
		C2H2 Zn finger	1068..1088	CDD:275368	10/21 (48%)
		zf-H2C2_2	1080..1105	CDD:463886	14/24 (58%)
		C2H2 Zn finger	1096..1116	CDD:275368	9/19 (47%)
cbt	NP_722636.1	C2H2 Zn finger	265..287	CDD:275368	6/21 (29%)
		COG5048	<270..362	CDD:227381	43/121 (36%)
		C2H2 Zn finger	295..317	CDD:275368	10/21 (48%)
		zf-H2C2_2	309..332	CDD:463886	12/22 (55%)
		C2H2 Zn finger	325..345	CDD:275368	9/19 (47%)