DRSC/TRiP Functional Genomics Resources

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Protein Alignment sr and egr1

DIOPT Version :10

Sequence 1:NP_001262693.1 Gene:sr / 42162 FlyBaseID:FBgn0003499 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_571323.1 Gene:egr1 / 30498 ZFINID:ZDB-GENE-980526-320 Length:511 Species:Danio rerio


Alignment Length:559 Identity:171/559 - (30%)
Similarity:235/559 - (42%) Gaps:152/559 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   729 MNAAAAAAAAAAQQQHQQQQQHQQQLPSPQLGVLAG----------PMS---------PPSNSLG 774
            :||.|...|.....:..:|..|           |||          |:|         ||.:..|
Zfish    46 LNATAPEGAVFGSGEPGEQFDH-----------LAGDTLSEISMEKPLSDQTYSTQRLPPISYTG 99

  Fly   775 NSWGLPSPD--KTMFQPPLFSLPAHYATMQQQQQQQQQQQQQQQQQQAAGAAPSPYDDGRAAAAA 837
            .....|:.:  .:::..|||||.:....:............|.....::..:..|.....:.::|
Zfish   100 RFTLEPATNCSNSLWAEPLFSLVSGLVGINPPPASIPSSTSQATHPSSSSTSSIPSSSSSSTSSA 164

  Fly   838 AAQHAELLGLTMDCT-----PLLLKQPPPSYAGASAG-FPGLGDLHSS---HEQQLQQQQYVRSQ 893
                      ::.|:     |..:....|:|:.||.. ||..|...|:   ...|.....|..::
Zfish   165 ----------SLSCSVHQSEPNPIYSAAPTYSSASPDIFPESGPNFSTTVGTSLQYSSSTYPSAK 219

  Fly   894 ---PKYQWLDSPADY--AQQQQQVQQVQQQQQQQQTLVLPGPTSSASSSNAALGVLIPKQENYPD 953
               |.:.....| ||  .|||.::.                              |:|     ||
Zfish   220 TCNPSFSVPMIP-DYLFTQQQSEIS------------------------------LVP-----PD 248

  Fly   954 MQPSSNGTGYSGGSGGSSAAAAAAAAAAAAAVQLAEYSPSTSKGHEILSQVYQQSTVPLKLVPVK 1018
            .:|...       ..|...|........|.|         |..|.:.|..|||...:.    |.:
Zfish   249 QKPIQT-------QAGQQPALTPLHTIKAFA---------TQTGSQDLKSVYQSQLIK----PSR 293

  Fly  1019 PRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTT 1083
            .|||||||||||.||||||||||.|||||||||||||||||||||||||||||||:|||||||||
Zfish   294 MRKYPNRPSKTPPHERPYACPVETCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 358

  Fly  1084 HIRTHTGEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKKEKVRGEQQQQQQQQQQQQQQQQQQQ 1148
            |||||||||||:|:|||||||||||:|||.|:|::|:.||                   .::...
Zfish   359 HIRTHTGEKPFACEICGRKFARSDERKRHTKIHMRQKDKK-------------------AEKGAT 404

  Fly  1149 LQQQQEQHHLSLQQHQQYQQHHLLHSADLAIVTS-----SASMXRLENSASSVDQAQTPTP---T 1205
            ...|....::|:........:.       :.:||     |:....:.:..||......|:|   |
Zfish   405 AAVQSSVSNISISASSPVSSYP-------SPITSYPSPVSSFPSPVNSCYSSPVHTSYPSPSIAT 462

  Fly  1206 PAPAATQKVSLALALDLDESAFPFELTSDYGTLSPLTSP 1244
            ..|:||......:|     ::||..:.|:..: ||:|:|
Zfish   463 TYPSATSTFQTQVA-----TSFPTSVASNIYS-SPVTTP 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srNP_001262693.1 zf-C2H2 1036..1060 CDD:395048 22/23 (96%)
C2H2 Zn finger 1038..1060 CDD:275368 20/21 (95%)
zf-H2C2_2 1052..1077 CDD:463886 23/24 (96%)
C2H2 Zn finger 1068..1088 CDD:275368 18/19 (95%)
zf-H2C2_2 1080..1105 CDD:463886 22/24 (92%)
C2H2 Zn finger 1096..1116 CDD:275368 16/19 (84%)
egr1NP_571323.1 DUF3446 99..212 CDD:463400 21/122 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 133..169 3/45 (7%)
PRK10263 <189..>310 CDD:236669 43/176 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 291..312 16/20 (80%)
zf-C2H2 311..335 CDD:395048 22/23 (96%)
C2H2 Zn finger 313..335 CDD:275368 20/21 (95%)
zf-H2C2_2 327..352 CDD:463886 23/24 (96%)
C2H2 Zn finger 343..363 CDD:275368 18/19 (95%)
zf-H2C2_2 355..380 CDD:463886 22/24 (92%)
C2H2 Zn finger 371..391 CDD:275368 16/19 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 384..406 8/40 (20%)
DUF3432 403..498 CDD:403204 21/106 (20%)

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