DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sr and ace2

DIOPT Version :10

Sequence 1:NP_001262693.1 Gene:sr / 42162 FlyBaseID:FBgn0003499 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_594109.1 Gene:ace2 / 2541661 PomBaseID:SPAC6G10.12C Length:533 Species:Schizosaccharomyces pombe


Alignment Length:654 Identity:123/654 - (18%)
Similarity:198/654 - (30%) Gaps:210/654 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   536 SSNNSCNMYPQHNNNNNNNNNTTSSSTTTTSKQTTSES----------NTECVGSPGNHTQSHQQ 590
            ||..|...:.|..:...|::......|...||.|:..|          |...:.||.:|.|:.  
pombe     9 SSQKSFESFRQEESPACNHSYQRDYETFGDSKHTSFSSFAPFENEVSLNQAVIPSPPSHLQNF-- 71

  Fly   591 QQQQLQHNNTSSSNSNCHHSHQQQQQQQQQQHMSSPQQQYQQHQILHQQQQLPNHHHHHHHHHHH 655
             |.|..:::...:..|                   |..:......|..|..||:.|.:       
pombe    72 -QDQFDYSSVLKTPFN-------------------PLLEANSAYFLSNQISLPDSHSY------- 109

  Fly   656 HSQLQQLQQQQQQQQQQQQHQQQPLHQQQQLQHQQQQQHHQQHYQQH-AIQHQQSQQQASKISYR 719
                      .............||....|:       |.:|::..: |.....|||..|:|.| 
pombe   110 ----------ASSFDASLSPPSSPLTCVSQI-------HTEQNFNNNDAFSLTNSQQAFSEIGY- 156

  Fly   720 GIFTTTGNAMNAAAAAAAAAAQQQHQQQQQHQQQLPSPQLGV----------------------- 761
                               .|.....:....||.|..|:..:                       
pombe   157 -------------------DASNWIDELDSQQQVLSFPEFDIPEIKTETCSNKDHLENFDYLSSS 202

  Fly   762 LAGPMSPPSNSLGNSWGLPSPDKTMFQPPLFSLPAHYATMQQQQQQQQQQQQQQQQQQAAGAAPS 826
            :.....|.|:.|.:|..|.|.::.||      ||:....:.:.......::...|..|.:.|.|.
pombe   203 IPETSGPASSVLPSSSQLESFNEFMF------LPSSPPGLDEINGAPSFEELNFQISQPSPAHPV 261

  Fly   827 PYDDGRAA--AAAAAQHAELLGLTMDCTPLLLKQP----PPSYAGASAGFPGLGDLHSSHEQQLQ 885
            .......|  .:..:..|:|:.|          :|    .||:|           |.||. ..|.
pombe   262 DLSSPETAPNISPVSPFAQLVKL----------EPTSPQKPSFA-----------LDSSF-SHLD 304

  Fly   886 QQQYVRSQPKYQWLDSPADYAQQQQQ----------VQQVQQQQQQQQTLVLPGPTSSASSSNAA 940
            ..::..:|..:..|.|||:|..:.::          :..........|...|..|..|...:...
pombe   305 VCRHTDNQKAFAKLSSPAEYVSEFEKFSSVCDHGLDISNANINNTLTQQFALSAPYESCIVTKKP 369

  Fly   941 LGVLIPKQENYPDMQPSSNGTGYSGGSGGSSAAAAAAAAAAAAAVQLAEYSPSTSKGHEILSQVY 1005
            ...:..|:|.                             ..|..::.|:.|        |..||.
pombe   370 EPCITVKEEE-----------------------------QLAPKIESADLS--------ITPQVT 397

  Fly  1006 QQSTVPLKLVPV--------KPRKYPNR----PSKT-------PVHERPYACPVENCDRRFSRSD 1051
            :..:.|    ||        |.||...|    |.:|       |..:..|.|....|::|.:|..
pombe   398 EHDSKP----PVRISYDHRCKTRKQSTRICRIPPETMASLYCGPEADGKYVCLYNGCNKRIARKY 458

  Fly  1052 ELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDICGRKFARSDEKKRHAKVH 1116
            .:..||:.|...:|::|.:|...|.|...|..|:|.|...:|:.|: |.::|.|.|...||    
pombe   459 NVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH---- 518

  Fly  1117 LKQR 1120
             |||
pombe   519 -KQR 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srNP_001262693.1 zf-C2H2 1036..1060 CDD:395048 7/23 (30%)
C2H2 Zn finger 1038..1060 CDD:275368 6/21 (29%)
zf-H2C2_2 1052..1077 CDD:463886 7/24 (29%)
C2H2 Zn finger 1068..1088 CDD:275368 7/19 (37%)
zf-H2C2_2 1080..1105 CDD:463886 8/24 (33%)
C2H2 Zn finger 1096..1116 CDD:275368 7/19 (37%)
ace2NP_594109.1 COG5048 45..518 CDD:227381 109/608 (18%)
C2H2 Zn finger 448..467 CDD:275368 5/18 (28%)
C2H2 Zn finger 475..495 CDD:275368 7/19 (37%)

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