DRSC/TRiP Functional Genomics Resources

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Protein Alignment sr and egr3

DIOPT Version :9

Sequence 1:NP_001262693.1 Gene:sr / 42162 FlyBaseID:FBgn0003499 Length:1271 Species:Drosophila melanogaster
Sequence 2:XP_002932749.1 Gene:egr3 / 100488713 XenbaseID:XB-GENE-976448 Length:380 Species:Xenopus tropicalis


Alignment Length:366 Identity:139/366 - (37%)
Similarity:184/366 - (50%) Gaps:104/366 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   847 LTMDCTPLLLKQPPPSY-------AGASAGFPGLGDLH-------------SSHEQQLQQQQYVR 891
            |.::.|.||   |...|       :|:.|.:||..|.|             .::::..|...|..
 Frog     9 LQVNMTSLL---PDSLYPEEGQDLSGSLAIYPGGNDQHYPVMSTDNVIDLGLNNDKNSQDLSYNG 70

  Fly   892 S-QP---------KYQWLDSPADYAQQ------QQQVQQVQQQQQQQQTLVLPGPTSSASSSNAA 940
            : ||         |:.: |||:.:.|:      ...:..||..|         .|....:.:...
 Frog    71 TFQPGNKTVTYLGKFSF-DSPSSWCQENIISLMSSGILGVQTSQ---------APNGGGTGNGGG 125

  Fly   941 LGVLIPKQENYPDMQ------PSSNGTG-----YSGGSGGSSA-------AAAAAAAAAAAAVQL 987
            .|.|:.:.:|  |::      ||..|.|     ..|..||..|       ::|..:..:.....:
 Frog   126 NGGLMGQNQN--DVESMFHGLPSYAGCGDLYHEQVGFQGGGMAPYTSQDYSSAKQSLDSGVFPMI 188

  Fly   988 AEYS---------PSTSKGHEILSQV---------------YQQSTV-----------PLKLVPV 1017
            .:|:         |...|..:.:..:               :::..|           ||.|.|:
 Frog   189 PDYNLFHHNTEMPPVDQKPFQNMEAIRVNPPPITPLETIKAFKEKQVLPSFGGMGHQPPLTLKPI 253

  Fly  1018 KPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLT 1082
            :||||||||||||:||||:|||.|.||||||||||||||:|||||.|||||||||||||||||||
 Frog   254 RPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHLT 318

  Fly  1083 THIRTHTGEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKK 1123
            ||||||||||||:||.||||||||||:|||||:||||:.||
 Frog   319 THIRTHTGEKPFACDFCGRKFARSDERKRHAKIHLKQKDKK 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srNP_001262693.1 zf-C2H2 1036..1060 CDD:278523 19/23 (83%)
C2H2 Zn finger 1038..1060 CDD:275368 18/21 (86%)
zf-H2C2_2 1052..1077 CDD:290200 22/24 (92%)
C2H2 Zn finger 1068..1088 CDD:275368 19/19 (100%)
zf-H2C2_2 1080..1105 CDD:290200 22/24 (92%)
C2H2 Zn finger 1096..1116 CDD:275368 17/19 (89%)
egr3XP_002932749.1 SFP1 <238..350 CDD:227516 89/111 (80%)
C2H2 Zn finger 274..296 CDD:275368 18/21 (86%)
COG5048 300..>352 CDD:227381 48/51 (94%)
C2H2 Zn finger 304..324 CDD:275368 19/19 (100%)
C2H2 Zn finger 332..352 CDD:275368 17/19 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11095
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000710
OrthoInspector 1 1.000 - - otm48210
Panther 1 1.100 - - O PTHR23235
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.130

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