DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and AT1G74360

DIOPT Version :9

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_565084.1 Gene:AT1G74360 / 843777 AraportID:AT1G74360 Length:1106 Species:Arabidopsis thaliana


Alignment Length:548 Identity:119/548 - (21%)
Similarity:203/548 - (37%) Gaps:143/548 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 LNLTL------VVNSTGSMHCKYLSDLTSKKAWIFVPCHGMTNCSNNRSIIAEDKDQLD------ 258
            ||||.      :....|::.|....||:            ..|.|.|......|.::|.      
plant   622 LNLTRNNFSGEIPQEIGNLKCLQNLDLS------------FNNFSGNFPTSLNDLNELSKFNISY 674

  Fly   259 --FVNVRMEQEGWYTCVESNS-LG------------QSNSTAYL--RVV----RSLHVLEAGVAS 302
              |::..:...|.....:.:| ||            ..|:|..:  :|:    |:|.::...:|.
plant   675 NPFISGAIPTTGQVATFDKDSFLGNPLLRFPSFFNQSGNNTRKISNQVLGNRPRTLLLIWISLAL 739

  Fly   303 GSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDS 367
                :.:|:...|..|::      |.|..|.|:.:.:  |....:|.|..|.       ..||.|
plant   740 ----ALAFIACLVVSGIV------LMVVKASREAEID--LLDGSKTRHDMTS-------SSGGSS 785

  Fly   368 ---SGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPRSHLVLGATLGEGAFGR 429
               ||.     :.|:|:.|...|........:.|:|..                  .:|.|.:|.
plant   786 PWLSGK-----IKVIRLDKSTFTYADILKATSNFSEER------------------VVGRGGYGT 827

  Fly   430 VVMAEV-NNAIVAVKMVKEGHTDDDIASLVREMEVMKIIG----RHINIINLLGCCSQNGPLYVI 489
            |....: :...||||.::...|:.: .....||||:....    .|.|::.|.|.|.......::
plant   828 VYRGVLPDGREVAVKKLQREGTEAE-KEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILV 891

  Fly   490 VEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRC-- 552
            .||...|:|::.:         .|:...|           .|..|..|..:|||:.:| ...|  
plant   892 HEYMGGGSLEELI---------TDKTKLQ-----------WKKRIDIATDVARGLVFL-HHECYP 935

  Fly   553 --IHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSD 615
              :|||:.|.|||:......::.||||||.:...|.: .:|.....|.::|||..|.....::.|
plant   936 SIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSH-VSTVIAGTIGYVAPEYGQTWQATTRGD 999

  Fly   616 VWSYGILLWEIMTYGQQPYPTIMSAEELYT----YLMSGQRM----------EKPAKCSMNIYIL 666
            |:|||:|..|:.| |::   .:...||...    .:|:|...          .||...:..:..|
plant  1000 VYSYGVLTMELAT-GRR---AVDGGEECLVEWARRVMTGNMTAKGSPITLSGTKPGNGAEQMTEL 1060

  Fly   667 MR---QCWHFNADDRPPFTEIVEYMDKL 691
            ::   :|...:...||...|::..:.|:
plant  1061 LKIGVKCTADHPQARPNMKEVLAMLVKI 1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 112..191 CDD:299845
IG_like 113..191 CDD:214653
IG_like 205..289 CDD:214653 20/111 (18%)
PKc_like 404..692 CDD:304357 73/314 (23%)
STYKc 416..688 CDD:214568 72/297 (24%)
AT1G74360NP_565084.1 PLN00113 43..1085 CDD:215061 118/543 (22%)
LRR_RI <106..342 CDD:238064
leucine-rich repeat 113..136 CDD:275380
leucine-rich repeat 137..158 CDD:275380
leucine-rich repeat 159..183 CDD:275380
leucine-rich repeat 184..207 CDD:275380
leucine-rich repeat 208..253 CDD:275380
leucine-rich repeat 254..277 CDD:275380
LRR_RI 276..481 CDD:238064
leucine-rich repeat 278..301 CDD:275380
leucine-rich repeat 302..325 CDD:275380
leucine-rich repeat 326..374 CDD:275380
leucine-rich repeat 375..398 CDD:275380
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 423..446 CDD:275380
leucine-rich repeat 447..468 CDD:275380
leucine-rich repeat 546..595 CDD:275380
leucine-rich repeat 596..617 CDD:275380
leucine-rich repeat 619..642 CDD:275380 5/19 (26%)
leucine-rich repeat 643..666 CDD:275380 6/34 (18%)
STKc_IRAK 820..1088 CDD:270968 72/294 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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