DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and Frk

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_077344.1 Gene:Frk / 79209 RGDID:621423 Length:506 Species:Rattus norvegicus


Alignment Length:487 Identity:147/487 - (30%)
Similarity:215/487 - (44%) Gaps:119/487 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 IAEDKDQLDFVNVRMEQEGWY------TCVESNSLGQSNST-AYLRVVR---------SLHVLEA 298
            :|||:.        ::.|.|:      ...|...|...|.| |:|  :|         ||.||:.
  Rat   106 VAEDRS--------LQAEPWFFGAIKRADAEKQLLYSENQTGAFL--IRESESQKGDFSLSVLDE 160

  Fly   299 GVASGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIRK-------MKHEKVLKQRIETVHQWTKKV 356
            ||..                           .|.||:       :...|......|.|:.:|.  
  Rat   161 GVVK---------------------------HYRIRRLDEGGFFLTRRKTFSTLNEFVNYYTT-- 196

  Fly   357 IIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPRSHLVLGAT 421
                     .|.|....:..|.::||           .|.|| :..:.....||:.|:.:.|...
  Rat   197 ---------TSDGLCVKLEKPCLKIQ-----------VPTPF-DLSYKTVDQWEIDRNSIQLLKR 240

  Fly   422 LGEGAFGRVVMAEVNNAI-VAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGP 485
            ||.|.||.|.....||.. ||||.:|.|..|.:  ..:||.::||.: ||..:|.|...|:...|
  Rat   241 LGSGQFGEVWEGLWNNTTPVAVKTLKPGSMDPN--DFLREAQIMKSL-RHPKLIQLYAVCTLEDP 302

  Fly   486 LYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASR 550
            :|:|.|...||:|:::|..:   |..:.|.:.|               :..|.|:|.||.||.|:
  Rat   303 IYIITELMRHGSLQEYLQND---GGSKIRLTQQ---------------VDMAAQVASGMAYLESQ 349

  Fly   551 RCIHRDLAARNVLVSDDYVLKIADFGLAR--DIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSK 613
            ..||||||||||||.:..:.|:|||||||  .:.:.|.|......:||:||.|||:::...:..|
  Rat   350 NYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKLPVKWTAPEAIRTNKFSIK 414

  Fly   614 SDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQ--RMEKPAKCSMNIYILMRQCWHFNAD 676
            |||||:||||:||:|||:.||..:..|:.::   |.||  |:.:|:.|....|.:|.:||:....
  Rat   415 SDVWSFGILLYEIITYGKMPYSGMTGAQVIH---MLGQNYRLPQPSNCPEQFYSIMMECWNVEPK 476

  Fly   677 DRPPFTEIVEYMDKLLQTKEDYLDVDIANLDT 708
            .||.|       :.|....|||.:.|.:..||
  Rat   477 QRPTF-------ETLHWKLEDYFEPDSSYSDT 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250 11/45 (24%)
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353 0/3 (0%)
Ig strand F 269..274 CDD:409353 1/10 (10%)
Ig strand G 282..285 CDD:409353 2/3 (67%)
Protein Kinases, catalytic domain 404..692 CDD:473864 107/292 (37%)
FrkNP_077344.1 SH3_Src_like 48..105 CDD:212779
SH2_Src_Frk 113..208 CDD:199831 24/134 (18%)
PTKc_Frk_like 226..495 CDD:270653 111/299 (37%)
Blue background indicates that the domain is not in the aligned region.

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