DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and Epha5

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_063129722.1 Gene:Epha5 / 79208 RGDID:620831 Length:1040 Species:Rattus norvegicus


Alignment Length:733 Identity:170/733 - (23%)
Similarity:285/733 - (38%) Gaps:213/733 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NKTPAITNNANQSSTSSADLDDGAADDDDNKADLPVNVSSKPYWR---NPKKMSFLQTRPSGSLL 121
            :|.|..:....::|||.                    |..|.|:|   :|..|:.  |||..   
  Rat   322 SKCPPHSYTHEEASTSC--------------------VCEKDYFRRESDPPTMAC--TRPPS--- 361

  Fly   122 TLNCHALGNPEPNITWYRNGTVDWTRGYGSLKRNRWTLTMEDLVPGDCGN-------YTCKVCNS 179
                 |..|...|:                   |..::.:|.:.|.|.|.       ..||.|||
  Rat   362 -----APRNAISNV-------------------NETSVFLEWIPPADTGGRKDVSYYIACKKCNS 402

  Fly   180 L--------GCIRH--------DTQVIVSDRVNHKPILMTGPLNLTLVVNSTGSMHCKYLSDLTS 228
            .        |.:|:        :|.|:::|.:.|        .|.|..:.:...     :||| |
  Rat   403 HAGVCEECGGHVRYLPQQIGLKNTSVMMADLLAH--------TNYTFEIEAVNG-----VSDL-S 453

  Fly   229 KKAWIFVPCHGMTN---------------CSNNRSIIAEDKDQLDFVNVRME-------QEGWYT 271
            .....:|..:..||               ..|:.|:..::.|:.:.:.:..|       ||..||
  Rat   454 PGTRQYVSVNVTTNQAAPSPVTNVKKGKIAKNSISLSWQEPDRPNGIILEYEIKYFEKDQETSYT 518

  Fly   272 CVESNSL-----GQSNSTAYLRVVRSLHVLEAGV---------------ASGSLHSTSFVYIFVF 316
            .::|...     |...::.|:..:|:......||               ||........:.:.|.
  Rat   519 IIKSKETTITAEGLKPASVYVFQIRARTAAGYGVFSRRFEFETTPVSVAASNDQSQIPIIAVSVT 583

  Fly   317 GGLIFIFMTTLFVF------------YAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSG 369
            .|:|.:.:...|:.            .::..:.|..::         |.          .|.|..
  Rat   584 VGVILLAVMIGFLLSGSCCECGCGRASSLCAVAHPSLI---------WR----------CGYSKA 629

  Fly   370 SMDTMIMPVVRIQKQRTTVLQNGNEPAPF-------NEYEFPLDSNWELPR----SHLVLGATLG 423
            ..|         .::......||:...|.       :.||.|..:..|..:    |.:.:...:|
  Rat   630 KQD---------PEEEKMHFHNGHIKLPGVRTYIDPHTYEDPTQAVHEFAKEIEASCITIERVIG 685

  Fly   424 EGAFGRVVMAEV-----NNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGR--HINIINLLGCCS 481
            .|.||.|....:     ....||:|.:|.|:|:......:.|..:|   |:  |.|||:|.|..:
  Rat   686 AGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLSEASIM---GQFDHPNIIHLEGVVT 747

  Fly   482 QNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDY 546
            ::.|:.::.||..:|:|..||.||         |..          .|...|:.....||.||.|
  Rat   748 KSKPVMIVTEYMENGSLDTFLKKN---------DGQ----------FTVIQLVGMLRGIAAGMKY 793

  Fly   547 LASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNT-NGRLPIKWMAPESLQEKFY 610
            |:....:||||||||:|::.:.|.|::||||:|.::........| .|::||:|.|||::..:.:
  Rat   794 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 858

  Fly   611 DSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNA 675
            .|.||||||||::||:::||::|| ..|:.:::...:..|.|:..|..|...:|.||..||..:.
  Rat   859 TSASDVWSYGIVMWEVVSYGERPY-WEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKDR 922

  Fly   676 DDRPPFTEIVEYMDKLLQ 693
            :.||.|.:||..:|||::
  Rat   923 NSRPKFDDIVNMLDKLIR 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 24/115 (21%)
Ig strand B 121..125 CDD:409353 0/3 (0%)
Ig strand C 134..138 CDD:409353 1/3 (33%)
Ig strand E 157..161 CDD:409353 0/3 (0%)
Ig strand F 171..176 CDD:409353 1/11 (9%)
Ig strand G 184..187 CDD:409353 1/10 (10%)
Ig 200..289 CDD:472250 20/115 (17%)
Ig strand B 216..220 CDD:409353 0/3 (0%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 1/3 (33%)
Ig strand F 269..274 CDD:409353 2/4 (50%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 97/299 (32%)
Epha5XP_063129722.1 None

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