DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and Ephb4

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_003751205.1 Gene:Ephb4 / 686310 RGDID:1583193 Length:996 Species:Rattus norvegicus


Alignment Length:311 Identity:99/311 - (31%)
Similarity:163/311 - (52%) Gaps:38/311 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 PFNEYEFPLDSNWELPR----SHLVLGATLGEGAFGRVVMAEV-----NNAIVAVKMVKEGHTDD 452
            ||. ||.|.::..|..:    |::.:...:|.|.||.|....:     ..:.||:|.:|.|:|:.
  Rat   602 PFT-YEDPNEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER 665

  Fly   453 DIASLVREMEVMKIIGR--HINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRD 515
            .....:.|..:|   |:  |.|||.|.|..:.:.|:.::.|:..:|.|..||..|         |
  Rat   666 QRREFLSEASIM---GQFEHPNIIRLEGVVTNSVPVMILTEFMENGALDSFLRLN---------D 718

  Fly   516 SSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARD 580
            ..          .|...|:.....||.||.|||....:||||||||:||:.:.|.|::||||:|.
  Rat   719 GQ----------FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF 773

  Fly   581 IQ---STDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEE 642
            ::   |...|..:..|::||:|.|||::..:.:.|.||.|||||::||:|::|::|| ..||.::
  Rat   774 LEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY-WDMSNQD 837

  Fly   643 LYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIVEYMDKLLQ 693
            :...:....|:..|..|..:::.||..||..:.:.||.|.::|..:||:::
  Rat   838 VINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 95/301 (32%)
Ephb4XP_003751205.1 EphR_LBD_B4 17..196 CDD:198442
FN3 324..429 CDD:238020
fn3 444..527 CDD:394996
EphA2_TM <573..621 CDD:464211 6/19 (32%)
PTKc_EphR_B 619..887 CDD:173638 93/290 (32%)
SAM_EPH-B4 916..982 CDD:188953
Blue background indicates that the domain is not in the aligned region.

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