DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and abl2

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_005166946.1 Gene:abl2 / 570636 ZFINID:ZDB-GENE-020809-2 Length:1182 Species:Danio rerio


Alignment Length:647 Identity:175/647 - (27%)
Similarity:266/647 - (41%) Gaps:138/647 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GARSQNKTPAITNNANQSSTSSADLDDGAADDDDNKADLPVNVSSKPYWRNPKKMSFLQTRPSGS 119
            |.::|.::......:|::|:|.....||.......     :.::..|..|:......:...|..:
Zfish    15 GIQTQPQSQQQQGRSNRASSSGRRPRDGGGGGSST-----LTLTGTPPGRSAAAAVNIMPDPGIN 74

  Fly   120 LLTLNCHALGNPEPNITWYRNGTVDWTRGYGSLKRNRWTLTMEDLVPGDCGNYTCKVCNSLGCIR 184
            :.||:..||..|....:......|.|     |.|.                       |.||...
Zfish    75 VFTLHSEALHRPFGLDSTALTEAVRW-----SSKE-----------------------NLLGAAE 111

  Fly   185 HDTQVIVS--DRV---NHKPILMTGPLNLTLVVNSTGSMHCKYLSDLTSKKAWIFVPCHGMTNCS 244
            .|..:.|:  |.|   ::...:..|.....|..|..|..     |::.||....:||.:.:|..:
Zfish   112 SDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEW-----SEVRSKNGQGWVPSNYITPVN 171

  Fly   245 NNRSIIAEDKDQLDFVNVRMEQEGWYTCVESNSLGQ------SNSTAYLRVVRSLHVLEAGVASG 303
            :                  :|:..||....|.|..:      .|.:..:|...|    ..|..|.
Zfish   172 S------------------LEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESES----SPGQLSI 214

  Fly   304 SLHSTSFVYIF----VFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGG 364
            ||.....||.:    ...|.:::...:.|...|.....|..|....:.|:|....|.        
Zfish   215 SLRYEGRVYHYRINTASDGKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYPAPKC-------- 271

  Fly   365 GDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPRSHLVLGATLGEGAFGR 429
                                        |:|..:.  ..|:...||:.|:.:.:...||.|.:|.
Zfish   272 ----------------------------NKPTVYG--VSPIHDKWEMERTDITMKHKLGGGQYGE 306

  Fly   430 VVMA--EVNNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEY 492
            |.:.  :..|..||||.:||...  ::...::|..|||.: :|.|::.|||.|:...|.|::.||
Zfish   307 VYVGVWKKYNLTVAVKTLKEDTM--EVEEFLKEASVMKEV-KHPNLVQLLGVCTLEPPFYIVTEY 368

  Fly   493 APHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDL 557
            .|||||.|:|       |:.:||.           :....|:..|.||:..|:||..:..|||||
Zfish   369 MPHGNLLDYL-------RECERDQ-----------VNAVVLLYMATQISSAMEYLEKKNFIHRDL 415

  Fly   558 AARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGIL 622
            ||||.||.:::|:|:|||||:| :.:.|.|..:...:.||||.|||||....:..|||||::|:|
Zfish   416 AARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVL 479

  Fly   623 LWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEI 684
            ||||.|||..|||.| ...::|..|..|.|||:|..|...:|.|||.||.::..|||.|.||
Zfish   480 LWEIATYGMSPYPGI-DLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWQWSPLDRPSFAEI 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 16/89 (18%)
Ig strand B 121..125 CDD:409353 2/3 (67%)
Ig strand C 134..138 CDD:409353 0/3 (0%)
Ig strand E 157..161 CDD:409353 0/3 (0%)
Ig strand F 171..176 CDD:409353 0/4 (0%)
Ig strand G 184..187 CDD:409353 0/2 (0%)
Ig 200..289 CDD:472250 16/94 (17%)
Ig strand B 216..220 CDD:409353 1/3 (33%)
Ig strand C 229..233 CDD:409353 1/3 (33%)
Ig strand E 255..259 CDD:409353 0/3 (0%)
Ig strand F 269..274 CDD:409353 2/4 (50%)
Ig strand G 282..285 CDD:409353 1/2 (50%)
Protein Kinases, catalytic domain 404..692 CDD:473864 115/283 (41%)
abl2XP_005166946.1 SH3_Abl 116..169 CDD:212784 12/57 (21%)
SH2_ABL 174..267 CDD:198189 21/96 (22%)
PTKc_Abl 286..548 CDD:270645 114/278 (41%)
FABD 1057..1182 CDD:197885
Blue background indicates that the domain is not in the aligned region.

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