DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and ltk

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001006661.2 Gene:ltk / 564470 ZFINID:ZDB-GENE-030616-115 Length:1530 Species:Danio rerio


Alignment Length:670 Identity:170/670 - (25%)
Similarity:255/670 - (38%) Gaps:206/670 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LDDGAADDDDNKADLPVNVSSKPYWRNPKKMSFLQTRPSGSLLTLNCHALGNPEPNITWYRNGTV 143
            |||.:||..|..:           :.:|....|||     .|..:..|.    |..|..|.|   
Zfish   735 LDDISADGQDGLS-----------FVHPMGKIFLQ-----PLAAMESHG----EAEIVVYLN--- 776

  Fly   144 DWTRGYGSLKRNRWTLTMEDLVPGDCGNYTCKVCNSLGCIR-HDTQVIV----SDRVNHKPILMT 203
                                          |..|.:..|.| .||::|:    ||.|       .
Zfish   777 ------------------------------CSHCKTQSCKRDEDTKLILCLCDSDEV-------L 804

  Fly   204 GPLNLTLVVNSTGSMHCKYLSDLTSKKAWIFVPCHGMTNCSNNRSIIAEDKDQLDFVNVRMEQEG 268
            .|.|:|                                 |:..:..:.:      |:|..:    
Zfish   805 APDNVT---------------------------------CAGTKHSLCQ------FINKHL---- 826

  Fly   269 WYTCVESNSLGQSNSTAYLRVVRSLHVLEAGVASGSLHSTSFVYIF------VFGGLIFIFMTTL 327
                       |.||:..  |...|.|....:|.|   ..|.|:|.      |..|::....:..
Zfish   827 -----------QHNSSPL--VCPPLVVPMGSLADG---PPSLVFIMAGIVSTVVTGVVLTCASLT 875

  Fly   328 FVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNG 392
            .::|  ||..|...::.|:::                            |..::.|.|::.:...
Zfish   876 LIYY--RKKNHLHAVRIRLQS----------------------------PEYKLSKIRSSTIMTD 910

  Fly   393 NEP--------APFNEYEFPLDSNWELPRSHLVLGATLGEGAFGRVVMAEV------NNAI-VAV 442
            ..|        |..:|.:       |:||.::.|...||.||||.|...:|      |.|: ||:
Zfish   911 YNPNYGYFGKAASLSELK-------EVPRKNITLLRALGHGAFGEVYEGQVLGMNGENTAMQVAI 968

  Fly   443 KMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRP 507
            |.:.|..::.|....:.|..:|.... |.||:..:|...|..|.::::|....|::|.||..|||
Zfish   969 KTLPEICSEQDEMDFLMEALIMSKFS-HQNIVRCIGVSLQILPRFILLELMTGGDMKSFLRLNRP 1032

  Fly   508 FGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVS---DDYV 569
                :...||.         ::..:|:..|..||.|..||.....||||:||||.|::   .|.|
Zfish  1033 ----RTNHSSS---------LSMLELLHMARDIALGCRYLEENHFIHRDIAARNCLLTCPGPDRV 1084

  Fly   570 LKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPY 634
            .||.|||:||||....||||.....||:|||.||:..|..:..|:|.||:|:|||||.:.|..||
Zfish  1085 AKIGDFGMARDIYRASYYRKGGRAMLPVKWMPPEAFLEGIFTCKTDTWSFGVLLWEIFSLGYMPY 1149

  Fly   635 PTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIVEYMDKLLQTKEDYL 699
            | ..:.:|:..::..|.||:.|..|...:|.:|.|||....:.||.||.|:|.::...|      
Zfish  1150 P-CKTNQEVLEFVTGGGRMDPPKSCPGPVYRIMTQCWQHCPEHRPNFTTILERINYCTQ------ 1207

  Fly   700 DVDIANLDTPPSTSDEEEDE 719
            |.|:.|...|.......|:|
Zfish  1208 DPDVINTPLPVECGPPVEEE 1227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 16/90 (18%)
Ig strand B 121..125 CDD:409353 0/3 (0%)
Ig strand C 134..138 CDD:409353 1/3 (33%)
Ig strand E 157..161 CDD:409353 0/3 (0%)
Ig strand F 171..176 CDD:409353 1/4 (25%)
Ig strand G 184..187 CDD:409353 1/3 (33%)
Ig 200..289 CDD:472250 9/88 (10%)
Ig strand B 216..220 CDD:409353 0/3 (0%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 0/3 (0%)
Ig strand F 269..274 CDD:409353 0/4 (0%)
Ig strand G 282..285 CDD:409353 2/2 (100%)
Protein Kinases, catalytic domain 404..692 CDD:473864 107/297 (36%)
ltkNP_001006661.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 635..671
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1313..1334
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1389..1420
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1492..1530
Blue background indicates that the domain is not in the aligned region.

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