DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and epha7

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001038444.2 Gene:epha7 / 562195 ZFINID:ZDB-GENE-030131-3745 Length:1016 Species:Danio rerio


Alignment Length:772 Identity:182/772 - (23%)
Similarity:288/772 - (37%) Gaps:259/772 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NKTPAITNNANQSSTSSADLDDGAADDDDNKADLPVNVSSKPYWR---NPKKMSFLQTRPSGSLL 121
            ::.||.:.|..:.|. ..|.:||                   |:|   :|..:|.  |||..:  
Zfish   293 SRCPAHSYNDREGSW-RCDCEDG-------------------YYRALSDPPSVSC--TRPPSA-- 333

  Fly   122 TLNCHALGNPEPNITWYRNGT---VDWTRGYGSLKRN---------RWTLTMEDLVPGDCGNYTC 174
                     |: |:.:..|.|   ::||....:..||         |.|...|:..|  ||:...
Zfish   334 ---------PQ-NLLYNINHTTVSLEWTPPADTGGRNDVTYRIICRRCTWEPEECFP--CGSNVG 386

  Fly   175 KVCNSLGCIRHDTQVIVSDRVNHKPILMTGPLNLTLVVNSTGSMHCKYLSDL------------- 226
            ......|..  ||.|.::|.:.|        .|.|..|.:...     :|||             
Zfish   387 YSPQQSGLT--DTYVTITDLLAH--------ANYTFEVEAVNG-----VSDLSRTQRLFAAVSIA 436

  Fly   227 TSKKAWIF---VPCHGMTNC--------SNNRSIIAE---------------------------- 252
            ||:....|   :..|..|:.        |....:|.|                            
Zfish   437 TSQAGSTFFTNISVHFYTSADMFEVTAPSQVSEVIKERVQQHSVQLSWQEPDQPNGVITEYEIKY 501

  Fly   253 -DKDQLDFVNVRMEQEGWYTCVESNSLGQS-----NSTAYLRVVRSLHVLEAGVASGSLHSTS-- 309
             :|||.|.:         |:.|:|.|...:     .||||:..:|:......|:....|..|:  
Zfish   502 YEKDQKDRI---------YSTVKSKSTSATVNNLKPSTAYVFQIRAFTAAGYGIFGPRLEVTTKE 557

  Fly   310 ------------------FVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKV 356
                              ...:.|.|.:|.:||    ||..|...:|                  
Zfish   558 ESTGSATVISSEQNPVIIIAVVAVAGTIILVFM----VFGFIIGRRH------------------ 600

  Fly   357 IIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNW------------ 409
                   .|.|...                   |.|:|...| :::||....:            
Zfish   601 -------CGYSKAD-------------------QEGDEELYF-QFKFPGTKTYIDPETYEDPNRA 638

  Fly   410 ------ELPRSHLVLGATLGEGAFGRVVMAEV-----NNAIVAVKMVKEGHTDDDIASLVREMEV 463
                  ||..|.:.:...:|.|.||.|....:     .:..||:|.:|.|:|:......:.|..:
Zfish   639 VHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVSVAIKTLKVGYTEKQRRDFLCEASI 703

  Fly   464 MKIIGR--HINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAH 526
            |   |:  |.|:::|.|..::..|:.:::||..:|:|..||.|:         |..         
Zfish   704 M---GQFDHPNVVHLEGVVTRGKPVMIVIEYMENGSLDAFLRKH---------DGQ--------- 747

  Fly   527 VITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDI-QSTDYYRKN 590
             .|...|:.....||.||.||:....:||||||||:||:.:.|.|::||||:|.| ...:.....
Zfish   748 -FTVIQLVGMLRGIAAGMRYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIDDDPEAVYTT 811

  Fly   591 TNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEK 655
            |.|::|::|.|.|::|.:.:.|.||||||||::||:|:||::|| ..||.:::...:..|.|:..
Zfish   812 TGGKIPVRWTAMEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-WDMSNQDVIKAIEEGYRLPA 875

  Fly   656 PAKCSMNIYILMRQCWHFNADDRPPFTEIVEYMDKLLQTKEDYLDVDIANLDTPPST 712
            |..|...::.||..||..:..|||.|.:||..:||:::...        .|.||..|
Zfish   876 PMDCPPGLHQLMLDCWQKDRADRPKFDQIVGILDKMIRNPN--------TLKTPMGT 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 25/104 (24%)
Ig strand B 121..125 CDD:409353 0/3 (0%)
Ig strand C 134..138 CDD:409353 1/3 (33%)
Ig strand E 157..161 CDD:409353 1/3 (33%)
Ig strand F 171..176 CDD:409353 0/4 (0%)
Ig strand G 184..187 CDD:409353 0/2 (0%)
Ig 200..289 CDD:472250 26/146 (18%)
Ig strand B 216..220 CDD:409353 0/3 (0%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 2/3 (67%)
Ig strand F 269..274 CDD:409353 1/4 (25%)
Ig strand G 282..285 CDD:409353 1/2 (50%)
Protein Kinases, catalytic domain 404..692 CDD:473864 98/313 (31%)
epha7NP_001038444.2 EphR_LBD_A7 29..205 CDD:198453
FN3 <313..>543 CDD:442628 56/288 (19%)
FN3 464..555 CDD:238020 18/99 (18%)
EphA2_TM 583..648 CDD:464211 18/113 (16%)
PTKc_EphR_A 646..912 CDD:270651 96/288 (33%)
SAM_EPH-A7 937..1006 CDD:188947
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.