DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and map3k20a

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001314869.1 Gene:map3k20a / 559247 ZFINID:ZDB-GENE-070912-386 Length:789 Species:Danio rerio


Alignment Length:334 Identity:93/334 - (27%)
Similarity:154/334 - (46%) Gaps:68/334 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 GEGAFGRVVMAE--VNNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGP 485
            |.|:||.|..|.  ..:..||||         .:..:.:|.|::.::. |.|||...|...: .|
Zfish    23 GGGSFGSVYRARWLSQDREVAVK---------KLLKIEKEAEILSVLS-HRNIIKFYGAILE-AP 76

  Fly   486 LY-VIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLAS 549
            .| ::.|||..|:|.|:|      ..|...|            |:.:.::.:|..||:||.||.|
Zfish    77 NYGIVTEYASGGSLFDYL------SSDDSED------------ISMQQIMTWAMDIAKGMHYLHS 123

  Fly   550 R---RCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTN----GRLPIKWMAPESLQE 607
            .   :.|||||.:|||::|.|.||||.|||.::      ::...|:    |..|  |||||.:|.
Zfish   124 EAPVKVIHRDLKSRNVVLSSDSVLKICDFGASK------FHSHTTHMSLVGTFP--WMAPEVIQS 180

  Fly   608 KFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWH 672
            .......|.:|||::|||::|. :.|:..:...:..:..:...:|:..|:.|..:...|||.||.
Zfish   181 LPVSETCDTFSYGVVLWEMLTQ-EIPFKGLEGLQVAWLVVEKHERLTIPSSCPASFACLMRSCWA 244

  Fly   673 FNADDRPPFTEIVEYMDKL-------------LQTKEDY-LDVD-----IANLDTPPSTSDEEED 718
            ....:||.|..|:..::.:             ||.|.:: .:::     :..|:...||.::...
Zfish   245 TEPKERPLFKHILSTLESMWSDTQLPDKCNTFLQNKAEWRCEIEATLERLKRLERDLSTKEQALK 309

  Fly   719 ETD-NLQKW 726
            |.: .|:.|
Zfish   310 ERERRLKMW 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 84/291 (29%)
map3k20aNP_001314869.1 Protein Kinases, catalytic domain 22..263 CDD:473864 84/277 (30%)
SAM_MLTK 338..405 CDD:188928
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.