DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and PDGFRA

DIOPT Version :9

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001334757.1 Gene:PDGFRA / 5156 HGNCID:8803 Length:1114 Species:Homo sapiens


Alignment Length:846 Identity:218/846 - (25%)
Similarity:324/846 - (38%) Gaps:286/846 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 KMSFLQT-RPSGSLLTLNCHALGNPEPNITWYRNGTVDWTRGYG----------SLKRNRWTLTM 161
            :|..|:| ..||..:.:.|....|...::.|...|.|   :|.|          |:|. .:|||:
Human   242 EMEALKTVYKSGETIVVTCAVFNNEVVDLQWTYPGEV---KGKGITMLEEIKVPSIKL-VYTLTV 302

  Fly   162 EDLVPGDCGNYTCKVCNSLGCIRHDTQVIVSDRVNHKPILMTGPL-------------------- 206
            .:....|.|:|.|....:...::...:|.:|  |:.|..:...|.                    
Human   303 PEATVKDSGDYECAARQATREVKEMKKVTIS--VHEKGFIEIKPTFSQLEAVNLHEVKHFVVEVR 365

  Fly   207 ------------NLTLVVNST-------GSMHCKYLSDLTSKKAWIFVPCHGMTNCSNNRSIIAE 252
                        ||||:.|.|       .....:|.|.|...:|        ....|.:.:|:|:
Human   366 AYPPPRISWLKNNLTLIENLTEITTDVEKIQEIRYRSKLKLIRA--------KEEDSGHYTIVAQ 422

  Fly   253 DKDQ----------------LDFVN----------VRMEQEG-------WYTCVESNSLGQSNST 284
            ::|.                ||.|:          ||...||       |..|.:........|.
Human   423 NEDAVKSYTFELLTQVPSSILDLVDDHHGSTGGQTVRCTAEGTPLPDIEWMICKDIKKCNNETSW 487

  Fly   285 AYL-----RVVRSLH-----VLEAGVASGSLHSTSFVYIF---VFGG------------------ 318
            ..|     .::..:|     .:|..|....:..|..|...   :.|.                  
Human   488 TILANNVSNIITEIHSRDRSTVEGRVTFAKVEETIAVRCLAKNLLGAENRELKLVAPTLRSELTV 552

  Fly   319 ------LIFIFMTTLFVFYAIRKMKHEKVLKQR-IETVHQWTKKVIIFKPEGGGDSSGSMDTMIM 376
                  |:.|.:.:|.|...|.|.|....::.| ||::          .|:|             
Human   553 AAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESI----------SPDG------------- 594

  Fly   377 PVVRIQKQRTTVLQNGNEPAPFNEY------EFPLDSNWELPRSHLVLGATLGEGAFGRVVMAEV 435
                                  :||      :.|.||.||.||..||||..||.||||:||....
Human   595 ----------------------HEYIYVDPMQLPYDSRWEFPRDGLVLGRVLGSGAFGKVVEGTA 637

  Fly   436 NNAI-------VAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYA 493
            ....       |||||:|......:..:|:.|:::|..:|.|:||:||||.|:::||:|:|.||.
Human   638 YGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYC 702

  Fly   494 PHGNLKDFLYKNRP----------------FGRD-----------------------QDRDSSQP 519
            .:|:|.::|:|||.                ||.:                       :..|::|.
Human   703 FYGDLVNYLHKNRDSFLSHHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQY 767

  Fly   520 PP------------------SPPAHV---------------------ITEKDLIKFAHQIARGMD 545
            .|                  ..||..                     :|..||:.|.:|:||||:
Human   768 VPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDNSEGLTLLDLLSFTYQVARGME 832

  Fly   546 YLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFY 610
            :|||:.|:||||||||||::...::||.||||||||.....|....:..||:|||||||:.:..|
Human   833 FLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLY 897

  Fly   611 DSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNA 675
            .:.|||||||||||||.:.|..|||.:|.....|..:.||.||.||...:..:|.:|.:||:...
Human   898 TTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEP 962

  Fly   676 DDRPPFTEIVEYMDKLL--QTKEDY--LDVDIANLDTPPST-----SDEE------EDETDNLQK 725
            :.||.|..:.|.::.||  |.|:.|  :.:|....|.|...     ||..      ::|.|.|:.
Human   963 EKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDHPAVARMRVDSDNAYIGVTYKNEEDKLKD 1027

  Fly   726 W 726
            |
Human  1028 W 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 112..191 CDD:299845 21/89 (24%)
IG_like 113..191 CDD:214653 20/88 (23%)
IG_like 205..289 CDD:214653 26/160 (16%)
PKc_like 404..692 CDD:304357 133/372 (36%)
STYKc 416..688 CDD:214568 126/356 (35%)
PDGFRANP_001334757.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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