DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and Lmtk3

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_030098591.1 Gene:Lmtk3 / 381983 MGIID:3039582 Length:1451 Species:Mus musculus


Alignment Length:439 Identity:120/439 - (27%)
Similarity:186/439 - (42%) Gaps:99/439 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 SLHVLEAGVASGSL----HSTSF------------VYIFVFGGL---IFIFMTTLFVFYAIRKMK 337
            :|.:|.|..|||.|    |...|            |.:....||   ||:.:|.|.       .|
Mouse    33 ALILLAAVSASGCLASPAHPDGFALSRAPLAPPYAVVLISCSGLLAFIFLLLTCLC-------CK 90

  Fly   338 HEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGSM--------------DTMIMPVVRIQKQRTTV 388
            ...|..:..|            .|| |.|.||..              |..|:|:..:     ::
Mouse    91 RGDVRFKEFE------------NPE-GEDCSGEYTPPAEETSSSQSLPDVYILPLAEV-----SL 137

  Fly   389 LQNGNEPAPFNEYEFPLDSNWELPRSHLVLGATLGEGAFGRVVMAEV----NNAIVAVKMVKEGH 449
            .....:| |.::...||.    |.|.||.....:|.|.||:|::.||    :.|.|.||.::...
Mouse   138 PMPAPQP-PHSDISTPLG----LSRQHLSYLQEIGSGWFGKVILGEVFSDYSPAQVVVKELRASA 197

  Fly   450 TDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDR 514
            ...:....:.|.:..:.: :|.|::..||.|.:..|..:|:|:...|:||.:|...||       
Mouse   198 GPLEQRKFISEAQPYRSL-QHPNVLQCLGVCVETLPFLLIMEFCQLGDLKRYLRAQRP------- 254

  Fly   515 DSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLAR 579
            .....|..||..:.|   |.:...:||||:.:|.|...:|.|||.||.|::.|..::|.|:|||.
Mouse   255 PEGMSPELPPRDLRT---LQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 316

  Fly   580 DIQSTDYYRKNTNGRLPIKWMAPESLQEKF-------YDSKSDVWSYGILLWEIMTYGQQPYPTI 637
            .....|||.......:|::|.|||.|.|..       ...:|:|||.|:.|||:..:|.||| ..
Mouse   317 SNYKEDYYLTPERLWVPLRWAAPELLGELHGSFVLVDQSRESNVWSLGVTLWELFEFGAQPY-RH 380

  Fly   638 MSAEELYTYLMSGQRMEKPAKCSMNI------YILMRQCWHFNADDRPP 680
            :|.||:..:::..|.: |.|:..:.:      |.:::.||      |||
Mouse   381 LSDEEVLAFVVRQQHV-KLARPRLKLPYADYWYDILQSCW------RPP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 90/294 (31%)
Lmtk3XP_030098591.1 Protein Kinases, catalytic domain 162..437 CDD:473864 84/280 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.