DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and Nrk

DIOPT Version :9

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster


Alignment Length:615 Identity:157/615 - (25%)
Similarity:245/615 - (39%) Gaps:153/615 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 NRWTLTME----DLVPGDCGNYTCKVCNSLGCIRHDTQVIVSDRVNHKPILMTGP----LNLTLV 211
            |.|.|..|    ::.....|::....|:||               .|....|..|    :.||.:
  Fly   161 NDWVLIEEKKERNMFIKSRGHFRLPNCSSL---------------PHYNASMRRPNCSYIGLTEL 210

  Fly   212 VNSTGSMHCK------YLSDLTSKKAWIFVPC----------------------HGMTNCSNNRS 248
            ..|..|..|:      |:..:...|:.|  ||                      .|...|.|   
  Fly   211 KESEVSYDCRNGNGRFYMGTMNVSKSGI--PCQRWDTQYPHKHFQPPLVFHQLLEGENYCRN--- 270

  Fly   249 IIAEDKDQLDFVNVRMEQEGWYTC--------VESNSLGQSNSTAYLRVVRSLHVLEAGVASGSL 305
              |..::...:.....|...|..|        |:.|::.                |...:.....
  Fly   271 --AGGEEPHPWCYTVDESVRWQHCDIPMCPDYVDPNAVD----------------LNTPIKMEKF 317

  Fly   306 HSTSFVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGS 370
            .:.|.:::....|.:.|....|.:....:..||    |...:.....|.:..: ...||||..|:
  Fly   318 FTPSMIFLLAGIGFVAIVTLHLMILLVYKLSKH----KDYSQPAGAATAECSV-SMRGGGDCGGN 377

  Fly   371 MDTMIMPVVRIQKQRTTVLQNGN-----------EPAPFNEYEFPLDS----------------- 407
            ::|          .|.|:..|||           ..|..:.....|.:                 
  Fly   378 LNT----------SRETLGGNGNTNTLAKWGTIRSTATIHSNCVALTTVTNVSDAKGTKPNARLE 432

  Fly   408 NWELPRSHLVLGATLGEGAFGRVVMA-------EVNNAIVAVKMVKEGHTD------DDIASLVR 459
            ..|.||..:|...:||:||||||..|       :..:.:|||||:|:..:|      :..|.|:.
  Fly   433 KLEYPRGDIVYVRSLGQGAFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLA 497

  Fly   460 EMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPP 524
            |.:       |.||:.|||.|:...|:.::.||...|:|.:||....|:...|       .|:..
  Fly   498 EFD-------HPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYATHQ-------APTQD 548

  Fly   525 AHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRK 589
            ...:.|..|::.|..||.||.||:.|:.:|||||.||.|:::...:|||||||:..|...|||:.
  Fly   549 RLQLNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDYYKG 613

  Fly   590 NTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRME 654
            :.|..:||:||..||:....:..:||||:|||.|||:.::..||| ..::.||:..|:..|..:.
  Fly   614 DENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQPY-FGLTHEEVIKYIKEGNVLG 677

  Fly   655 KPAKCSMNIYILMRQCWHFNADDRPPFTEI 684
            .|....:::|.|||:||:....:||.|.||
  Fly   678 CPDNTPLSVYALMRRCWNRKPSERPGFAEI 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 112..191 CDD:299845 8/39 (21%)
IG_like 113..191 CDD:214653 8/39 (21%)
IG_like 205..289 CDD:214653 20/123 (16%)
PKc_like 404..692 CDD:304357 106/311 (34%)
STYKc 416..688 CDD:214568 102/282 (36%)
NrkNP_477255.1 CRD_FZ 67..212 CDD:295308 13/65 (20%)
KR 217..299 CDD:214527 13/88 (15%)
PTKc_Musk 435..713 CDD:133181 105/288 (36%)
Pkinase_Tyr 441..707 CDD:285015 100/280 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455243
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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