DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and Nrk

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_477255.1 Gene:Nrk / 36445 FlyBaseID:FBgn0020391 Length:724 Species:Drosophila melanogaster


Alignment Length:615 Identity:157/615 - (25%)
Similarity:245/615 - (39%) Gaps:153/615 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 NRWTLTME----DLVPGDCGNYTCKVCNSLGCIRHDTQVIVSDRVNHKPILMTGP----LNLTLV 211
            |.|.|..|    ::.....|::....|:||               .|....|..|    :.||.:
  Fly   161 NDWVLIEEKKERNMFIKSRGHFRLPNCSSL---------------PHYNASMRRPNCSYIGLTEL 210

  Fly   212 VNSTGSMHCK------YLSDLTSKKAWIFVPC----------------------HGMTNCSNNRS 248
            ..|..|..|:      |:..:...|:.|  ||                      .|...|.|   
  Fly   211 KESEVSYDCRNGNGRFYMGTMNVSKSGI--PCQRWDTQYPHKHFQPPLVFHQLLEGENYCRN--- 270

  Fly   249 IIAEDKDQLDFVNVRMEQEGWYTC--------VESNSLGQSNSTAYLRVVRSLHVLEAGVASGSL 305
              |..::...:.....|...|..|        |:.|::.                |...:.....
  Fly   271 --AGGEEPHPWCYTVDESVRWQHCDIPMCPDYVDPNAVD----------------LNTPIKMEKF 317

  Fly   306 HSTSFVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGS 370
            .:.|.:::....|.:.|....|.:....:..||    |...:.....|.:..: ...||||..|:
  Fly   318 FTPSMIFLLAGIGFVAIVTLHLMILLVYKLSKH----KDYSQPAGAATAECSV-SMRGGGDCGGN 377

  Fly   371 MDTMIMPVVRIQKQRTTVLQNGN-----------EPAPFNEYEFPLDS----------------- 407
            ::|          .|.|:..|||           ..|..:.....|.:                 
  Fly   378 LNT----------SRETLGGNGNTNTLAKWGTIRSTATIHSNCVALTTVTNVSDAKGTKPNARLE 432

  Fly   408 NWELPRSHLVLGATLGEGAFGRVVMA-------EVNNAIVAVKMVKEGHTD------DDIASLVR 459
            ..|.||..:|...:||:||||||..|       :..:.:|||||:|:..:|      :..|.|:.
  Fly   433 KLEYPRGDIVYVRSLGQGAFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLA 497

  Fly   460 EMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPP 524
            |.:       |.||:.|||.|:...|:.::.||...|:|.:||....|:...|       .|:..
  Fly   498 EFD-------HPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYATHQ-------APTQD 548

  Fly   525 AHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRK 589
            ...:.|..|::.|..||.||.||:.|:.:|||||.||.|:::...:|||||||:..|...|||:.
  Fly   549 RLQLNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDYYKG 613

  Fly   590 NTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRME 654
            :.|..:||:||..||:....:..:||||:|||.|||:.::..||| ..::.||:..|:..|..:.
  Fly   614 DENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQPY-FGLTHEEVIKYIKEGNVLG 677

  Fly   655 KPAKCSMNIYILMRQCWHFNADDRPPFTEI 684
            .|....:::|.|||:||:....:||.|.||
  Fly   678 CPDNTPLSVYALMRRCWNRKPSERPGFAEI 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 8/39 (21%)
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353 2/3 (67%)
Ig strand F 171..176 CDD:409353 0/4 (0%)
Ig strand G 184..187 CDD:409353 0/2 (0%)
Ig 200..289 CDD:472250 21/128 (16%)
Ig strand B 216..220 CDD:409353 1/3 (33%)
Ig strand C 229..233 CDD:409353 1/3 (33%)
Ig strand E 255..259 CDD:409353 0/3 (0%)
Ig strand F 269..274 CDD:409353 2/12 (17%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 106/311 (34%)
NrkNP_477255.1 CRD_FZ 67..212 CDD:470581 13/65 (20%)
KR 217..299 CDD:214527 13/88 (15%)
PTKc_Musk 435..713 CDD:133181 105/288 (36%)
Blue background indicates that the domain is not in the aligned region.

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