DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and Y50D4B.6

DIOPT Version :9

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_503375.2 Gene:Y50D4B.6 / 3565593 WormBaseID:WBGene00021745 Length:421 Species:Caenorhabditis elegans


Alignment Length:423 Identity:124/423 - (29%)
Similarity:202/423 - (47%) Gaps:76/423 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 IFVFGGLIFIFMTTLFV----FYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGSMDT 373
            :.:|..::.|.::.||.    ||.:||.:||:........:|..::|.    |....::..    
 Worm     7 LVIFYCIVVIALSVLFYYVWKFYYLRKEEHEETRSLESGIIHSSSQKT----PSSVRENES---- 63

  Fly   374 MIMPVVRIQKQRTTVLQNGNEPAPFN--------EYEFPLDSN----WELPRSHLVLGATLGEGA 426
                :::..::...:   |.|..|.|        :..|.:|.|    :.|        :.||.|.
 Worm    64 ----LLQANEENVPI---GLETEPINAIIKNLKFDERFEIDVNKFSFYNL--------SFLGNGY 113

  Fly   427 FGRVVMAEV-----------NNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCC 480
            :|:|....:           |:..||||.........:...:..|:.||.::|:|.||:.|:...
 Worm   114 YGKVFKERMHKKQKNGLDSENSLEVAVKRALRPEDPSEQQLMCEELNVMCVVGKHPNILALIRWI 178

  Fly   481 SQNGPLYVIVEYAPHGNLKDFL-YKNRPFGRD----QDRDSSQPPPSPPAHVITEKDLIKFAHQI 540
            ..| .:.::.|:...|:|.::| .:.|.|.:|    :|.          ..::...||:.||.||
 Worm   179 RTN-EILIVSEFVEKGDLVEYLRARRRYFNKDIVCVEDN----------GRLLCPTDLLSFAFQI 232

  Fly   541 ARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESL 605
            |.||.:|.:..|:|||||.|||.|..:.:::||||||||..::.:||||.|:...|:||:|||..
 Worm   233 ANGMKFLGNVACVHRDLALRNVFVKRNRIIRIADFGLARWHENKEYYRKKTDVGFPMKWLAPECF 297

  Fly   606 ---QEK---FYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEE----LYTYLMSGQRMEKPAKCS 660
               ||:   .:|||||:||||:.|:||.:.|..||..:....:    |..|:..|.::..|...|
 Worm   298 EFEQERENIKFDSKSDIWSYGVCLYEIFSLGVSPYEGLDFRPDYFQGLMKYVRDGNQLPSPEHGS 362

  Fly   661 MNIYILMRQCWHFNADDRPPFTEIVEYMDKLLQ 693
            ..||..|:.||:.|.|.||.|:|..::..||||
 Worm   363 DKIYEFMQSCWNLNPDKRPVFSECRDFFQKLLQ 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 112..191 CDD:299845
IG_like 113..191 CDD:214653
IG_like 205..289 CDD:214653
PKc_like 404..692 CDD:304357 103/317 (32%)
STYKc 416..688 CDD:214568 99/297 (33%)
Y50D4B.6NP_503375.2 PTKc 109..391 CDD:270623 99/292 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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