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Protein Alignment htl and Src42A

DIOPT Version :10

Sequence 1:	NP_524394.2	Gene:	htl / 42160	FlyBaseID:	FBgn0010389	Length:	729	Species:	Drosophila melanogaster
Sequence 2:	NP_001400996.1	Gene:	Src42A / 35524	FlyBaseID:	FBgn0264959	Length:	1606	Species:	Drosophila melanogaster

Alignment Length:	574	Identity:	171/574 - (29%)
Similarity:	239/574 - (41%)	Gaps:	131/574 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   190 IVSDRVNHKPIL--------------MTGPLNLTLVVNSTG---------SMHCKYLSDLTSKKA 231
            :||...:.:|:.              .|..|.||.:..|..         |..|.:||.:....|
  Fly  1111 VVSSTTSRQPLRRWSNQTPLKCTCHPATEELPLTAIEKSRSLPAACSASCSHTCAHLSVIDQSPA 1175

  Fly   232 WIFVPCHG---MTNCSNNRSIIAEDKDQLDFVNVRMEQEGWY----TCVESNS---LGQSNSTAY 286
              ...|.|   :|.....:|....:..:.:|:|    ::.||    ..:|:..   |.::...|:
  Fly  1176 --TTKCFGKTSLTTAKKGKSRRLSEFTRGEFLN----EKSWYFRKIKRIEAEKKLLLPENEHGAF 1234

  Fly   287 L-RVVRSLH-VLEAGVASGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETV 349
            | |...|.| .....|..|.......:.....|| .||...|.|           :.|:   |.|
  Fly  1235 LIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGG-FFIARRTTF-----------RTLQ---ELV 1284

  Fly   350 HQWTKKVIIFKPEGGGDSSGSMDTMIMPVVR---------IQKQRTTVLQNGNEPAPFNEYEFPL 405
            ..::|           ||.|....:..|.|:         |:|..|..|.:...
  Fly  1285 EHYSK-----------DSDGLCVNLCKPCVQTNSFSGVFEIEKPVTEGLSHRTR----------- 1327

  Fly   406 DSNWELPRSHLVLGATLGEGAFGRVVMAEVNNAI-VAVKMVKEGHTDDDIASLVREMEVMKIIGR 469
             ..||:.|:.|.....||.|.||.|.....||.. ||:|.:|.|..|.  ...:.|.::||.: |
  Fly  1328 -DQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMDP--KDFLAEAQIMKKL-R 1388

  Fly   470 HINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLI 534
            |..:|.|...|:...|:|:|.|...||:|.::|......||.                :..:.||
  Fly  1389 HTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRS----------------LKMQTLI 1437

  Fly   535 KFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKW 599
            ..|.|||.||.||.|:..||||||||||||.|..::|||||||||.|:. |.|......|.||||
  Fly  1438 DMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKE-DEYEARVGARFPIKW 1501

  Fly   600 MAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIY 664
            .|||:.....:..||||||:||||.|::|||:.|||.:.:||.| |.:..|.||.:|..|...:|
  Fly  1502 TAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVL-TQVEHGYRMPQPPNCEPRLY 1565

  Fly   665 ILMRQCWHFNADDRPPFTEIVEYMDKLLQTK-EDYLDVDIANLDTPPSTSDEEE 717
            .:|.:|||.:...||.|        :.||.| ||:.            |||:.:
  Fly  1566 EIMLECWHKDPMRRPTF--------ETLQWKLEDFY------------TSDQSD 1599

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.