DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and sev

DIOPT Version :9

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster


Alignment Length:648 Identity:171/648 - (26%)
Similarity:268/648 - (41%) Gaps:145/648 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LQTRPSGSLLTLNCHALGNPEPNITWYRNGTVDWTRGYGSLK---RNRWTLTMEDLVPGDCGNYT 173
            |..|....|..|....||....::||  .||.|   ..|||:   |:    :.|.|.....||:|
  Fly  1894 LHVRSFAELPELQLLELGPYSLSLTW--AGTPD---PLGSLQLECRS----SAEQLRRNVAGNHT 1949

  Fly   174 CKVCNSLGCIRHDTQVIVSDRVNHKPILMTG-------PL-NLTLVVNST--------GSMHCKY 222
            ..|...|           ..|..::..|:.|       || :.|..|..|        |....::
  Fly  1950 KMVVEPL-----------QPRTRYQCRLLLGYAATPGAPLYHGTAEVYETLGDAPSQPGKPQLEH 2003

  Fly   223 LSDLTSKKAWIFVPCHGMTNCSNNRSIIAEDKDQLDFVNVR-------------MEQEGWY---T 271
            :::...:..|.....:|......|...:....|      :|             :||..|.   .
  Fly  2004 IAEEVFRVTWTAARGNGAPIALYNLEALQARSD------IRRRRRRRRRNSGGSLEQLPWAEEPV 2062

  Fly   272 CVESNSLGQSNSTAYLRVVRSLH------------VLEAGVASGSLHSTSFVYIFVF----GGLI 320
            .||...|...|:|....:|:|||            .||.|....|..|......||.    |.|:
  Fly  2063 VVEDQWLDFCNTTELSCIVKSLHSSRLLLFRVRARSLEHGWGPYSEESERVAEPFVSPEKRGSLV 2127

  Fly   321 F-------IFMTTLFVFYAIRK-----MKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGSMDT 373
            .       |..:.:.....:||     ::.:|:|:|...::  |:.                   
  Fly  2128 LAIIAPAAIVSSCVLALVLVRKVQKRRLRAKKLLQQSRPSI--WSN------------------- 2171

  Fly   374 MIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPL--DSNWELPRSHLVLGATLGEGAFGRVVMAEVN 436
              :..::.|:|...| :|.......::.:..|  ..||    |.|.|...||.||||.|...::.
  Fly  2172 --LSTLQTQQQLMAV-RNRAFSTTLSDADIALLPQINW----SQLKLLRFLGSGAFGEVYEGQLK 2229

  Fly   437 N------AIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPH 495
            .      ..||:|.:::|.:  :.|.|::|.::|... :|.||:.|:|.|.....:.:|:|:...
  Fly  2230 TEDSEEPQRVAIKSLRKGAS--EFAELLQEAQLMSNF-KHENIVCLVGICFDTESISLIMEHMEA 2291

  Fly   496 GNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAAR 560
            |:|..:|...|.        :|...|.|.|. ::..:|:.....:|.|..||.....:|||||.|
  Fly  2292 GDLLSYLRAARA--------TSTQEPQPTAG-LSLSELLAMCIDVANGCSYLEDMHFVHRDLACR 2347

  Fly   561 NVLVSDD-------YVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWS 618
            |.||::.       ..:||.||||||||..:|||||...|.||::||:||||.:..:.::||||:
  Fly  2348 NCLVTESTGSTDRRRTVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMSPESLVDGLFTTQSDVWA 2412

  Fly   619 YGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPF 681
            :|:|.|||:|.|||||....:.|.| .::..|.|:::|..|:..:|.|:..||..:..:||.|
  Fly  2413 FGVLCWEILTLGQQPYAARNNFEVL-AHVKEGGRLQQPPMCTEKLYSLLLLCWRTDPWERPSF 2474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 112..191 CDD:299845 22/81 (27%)
IG_like 113..191 CDD:214653 21/80 (26%)
IG_like 205..289 CDD:214653 19/108 (18%)
PKc_like 404..692 CDD:304357 103/293 (35%)
STYKc 416..688 CDD:214568 99/279 (35%)
sevNP_511114.2 fn3 439..520 CDD:278470
FN3 826..921 CDD:238020
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
FN3 1799..1897 CDD:238020 1/2 (50%)
FN3 1993..2111 CDD:238020 22/123 (18%)
Pkinase_Tyr 2209..2481 CDD:285015 99/279 (35%)
PTKc_c-ros 2213..2483 CDD:270640 97/275 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455223
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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