DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and ephb4b

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_571492.1 Gene:ephb4b / 30691 ZFINID:ZDB-GENE-990415-65 Length:976 Species:Danio rerio


Alignment Length:669 Identity:157/669 - (23%)
Similarity:271/669 - (40%) Gaps:173/669 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 ADLPVNVSSKPYWRNPKKMSFLQTRPSGSLLTLNCHALGNPEPNITWYRNGTVDWTRGYGSLKRN 155
            :|||.:..:||           .:.|...:..:|...:             |::|:.......|:
Zfish   316 SDLPDSACTKP-----------PSAPRSIIYQINDTVV-------------TLEWSEPLDRGGRS 356

  Fly   156 RWTLTMEDLVPGDCGNYTCKVCNSLGCIRHDTQVIVSDRVNHKP---------ILMTGPLNLT-- 209
            ..:.::|           |..|....|::      .:|.:.::|         :::.|.|..|  
Zfish   357 DLSYSVE-----------CMHCRGSLCVQ------CADSITYRPGQMGVSGRRVIIRGLLPHTTY 404

  Fly   210 ----LVVNSTGSM-HCKYLS---DLTSKKAWIFVPCHGMTNCSNNRSIIA-------------ED 253
                |..|...:: |....|   ::|:.:. :.||..|:.....:.|.::             :|
Zfish   405 TFTVLAQNGVSAVSHTSPASSSVNITTSRD-VAVPVSGIRRIKASESSVSISWTVPPQTQHSIQD 468

  Fly   254 KDQLDFVNVRMEQEGW-YTCVESNSL---GQSNSTAYLRVVRSLHVLEAGVASGSLHSTSFVYI- 313
            . ||.: :::.:.:|| |....|:|:   ..|.::.|...||      |..|:|..|.:|.|.| 
Zfish   469 Y-QLRY-SLKGQDDGWQYVSSRSSSVVLNDLSRASQYQVQVR------ARTAAGYGHFSSAVSIS 525

  Fly   314 -----------------FVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKP 361
                             .|..||:.:....:...:..|:....:                     
Zfish   526 TLPDDEESPSRLMLTGVLVAIGLLILIAVVIVAVFCFRRSTRRR--------------------- 569

  Fly   362 EGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPR----SHLVLGATL 422
            :...|.||..         :..|...|..:     ||. ||.|.::..|..:    |.:.:...:
Zfish   570 DPDPDKSGQF---------LMGQGIKVYID-----PFT-YEDPNEAVREFAKEIDVSFVKIEEVI 619

  Fly   423 GEGAFGRVVMAEV-----NNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQ 482
            |.|.||.|....:     ....||:|.:|.|:||......:.|..:|... :|.|||:|.|..:.
Zfish   620 GAGEFGEVCRGRLKVPGKKENYVAIKTLKGGYTDKQRRDFLSEASIMGQF-QHPNIIHLEGVITA 683

  Fly   483 NGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYL 547
            :.|:.::.||..:|.|..||..|         |..          .|...|:.....||.||.||
Zfish   684 SCPVMILTEYMENGALDSFLRLN---------DGQ----------FTPIQLVGMLRGIASGMKYL 729

  Fly   548 ASRRCIHRDLAARNVLVSDDYVLKIADFGLAR---DIQSTDYYRKNTNGRLPIKWMAPESLQEKF 609
            :....:||||||||:||:.:.|.|::||||:|   :..|...|..:..|::||:|.|||::..:.
Zfish   730 SEMSFVHRDLAARNILVNSNLVCKVSDFGLSRFLTENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 794

  Fly   610 YDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFN 674
            :.|.||||||||::||:|::|::|| ..||.:::...:....|:..|.:|..:::.||..||...
Zfish   795 FTSASDVWSYGIVMWEVMSFGERPY-WDMSNQDVINAIEQDYRLPPPPECPASLHQLMLDCWQKE 858

  Fly   675 ADDRPPFTEIVEYMDKLLQ 693
            ...||.|..||..:|:|::
Zfish   859 RSSRPRFCAIVSALDRLIR 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 10/89 (11%)
Ig strand B 121..125 CDD:409353 0/3 (0%)
Ig strand C 134..138 CDD:409353 0/3 (0%)
Ig strand E 157..161 CDD:409353 0/3 (0%)
Ig strand F 171..176 CDD:409353 1/4 (25%)
Ig strand G 184..187 CDD:409353 0/2 (0%)
Ig 200..289 CDD:472250 22/115 (19%)
Ig strand B 216..220 CDD:409353 0/4 (0%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 2/3 (67%)
Ig strand F 269..274 CDD:409353 2/5 (40%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 96/299 (32%)
ephb4bNP_571492.1 EphR_LBD 25..198 CDD:470656
FN3 327..431 CDD:238020 18/133 (14%)
FN3 438..526 CDD:238020 22/95 (23%)
EphA2_TM 540..610 CDD:464211 15/105 (14%)
PTKc_EphR_B 608..876 CDD:173638 94/288 (33%)
SAM_superfamily 906..969 CDD:472832
Blue background indicates that the domain is not in the aligned region.

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