DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and Abl2

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001382059.1 Gene:Abl2 / 304883 RGDID:1590898 Length:1182 Species:Rattus norvegicus


Alignment Length:523 Identity:159/523 - (30%)
Similarity:236/523 - (45%) Gaps:105/523 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 NSLGCIRHDTQVIVS--DRV---NHKPILMTGPLNLTLVVNSTGSMHCKYLSDLTSKKAWIFVPC 237
            |.||....|..:.|:  |.|   ::...:..|.....|..|..|..     |::.||....:||.
  Rat   100 NLLGATESDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEW-----SEVRSKNGQGWVPS 159

  Fly   238 HGMTNCSNNRSIIAEDKDQLDFVNVRMEQEGWYTCVESNSLGQSNSTAYL---RVVRSLHVLEAG 299
            :.:|..::                  :|:..||....|.|..:     ||   .:..|..|.|:.
  Rat   160 NYITPVNS------------------LEKHSWYHGPVSRSAAE-----YLLSSLINGSFLVRESE 201

  Fly   300 VASGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKV---LKQRIET----VHQWTKKVI 357
            .:.|.| |.|..|    .|.::        .|.|......||   .:.|..|    ||..:..  
  Rat   202 SSPGQL-SISLRY----EGRVY--------HYRINTTTDSKVYVTAESRFSTLAELVHHHSTV-- 251

  Fly   358 IFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPRSHLVLGATL 422
                     :.|.:.|:..|..:.           |:|..:.  ..|:...||:.|:.:.:...|
  Rat   252 ---------ADGLVTTLHYPAPKC-----------NKPTVYG--VSPIHDKWEMERTDITMKHKL 294

  Fly   423 GEGAFGRVVMA--EVNNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGP 485
            |.|.:|.|.:.  :..:..||||.:||...  ::...::|..|||.| :|.|::.|||.|:...|
  Rat   295 GGGQYGEVYVGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEI-KHPNLVQLLGVCTLEPP 356

  Fly   486 LYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASR 550
            .|::.||.|:|||.|:|       |:..|:.           :|...|:..|.||:..|:||..:
  Rat   357 FYIVTEYMPYGNLLDYL-------RECSREE-----------VTAVVLLYMATQISSAMEYLEKK 403

  Fly   551 RCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSD 615
            ..|||||||||.||.:::|:|:|||||:| :.:.|.|..:...:.||||.|||||....:..|||
  Rat   404 NFIHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSD 467

  Fly   616 VWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPP 680
            ||::|:|||||.|||..|||.| ...::|..|..|.|||:|..|...:|.|||.||.::..|||.
  Rat   468 VWAFGVLLWEIATYGMSPYPGI-DLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPS 531

  Fly   681 FTE 683
            |.|
  Rat   532 FAE 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 4/12 (33%)
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353 0/2 (0%)
Ig 200..289 CDD:472250 17/91 (19%)
Ig strand B 216..220 CDD:409353 1/3 (33%)
Ig strand C 229..233 CDD:409353 1/3 (33%)
Ig strand E 255..259 CDD:409353 0/3 (0%)
Ig strand F 269..274 CDD:409353 2/4 (50%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 113/282 (40%)
Abl2NP_001382059.1 SH3_Abl 111..164 CDD:212784 12/57 (21%)
SH2_ABL 169..262 CDD:198189 26/121 (21%)
PTKc_Abl 281..543 CDD:270645 112/277 (40%)
FABD 1063..1182 CDD:197885
Blue background indicates that the domain is not in the aligned region.

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