DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and Fer

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001382687.1 Gene:Fer / 301737 RGDID:1306273 Length:823 Species:Rattus norvegicus


Alignment Length:342 Identity:114/342 - (33%)
Similarity:172/342 - (50%) Gaps:33/342 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 QRIETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSN 408
            ||...:.|:...:..|:..|..:....:|........|.|:...||.|          ..|.|..
  Rat   502 QRRHFIIQFVDNLYRFEGTGFSNIPQLIDHHFNTKQVITKKSGVVLLN----------PIPKDKK 556

  Fly   409 WELPRSHLVLGATLGEGAFGRVVMAEVNNAI-VAVKMVKEGHTDDDIASLVREMEVMKIIGRHIN 472
            |.|....:.||..||:|.||.|....:.:.. ||||..||....:.....::|.:::|... |.|
  Rat   557 WVLNHEDVSLGELLGKGNFGEVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYD-HPN 620

  Fly   473 IINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFA 537
            |:.|:|.|:|..|:|:|:|..|.|:...||.|.    :|:               :..|.|::|:
  Rat   621 IVKLIGVCTQRQPVYIIMELVPGGDFLSFLRKR----KDE---------------LKLKQLVRFS 666

  Fly   538 HQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAP 602
            ..:|.||.||..:.||||||||||.||.::..|||:|||::|. :....|..:...::||||.||
  Rat   667 LDVAAGMLYLEGKNCIHRDLAARNCLVGENNTLKISDFGMSRQ-EDGGVYSSSGLKQIPIKWTAP 730

  Fly   603 ESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILM 667
            |:|....|.|:|||||:||||||..:.|..|||. |:.::....:..|.||..|..|...|:.:|
  Rat   731 EALNYGRYSSESDVWSFGILLWETFSLGVCPYPG-MTNQQAREQVERGYRMSAPQNCPEEIFTIM 794

  Fly   668 RQCWHFNADDRPPFTEI 684
            .:||.:..::||.|:::
  Rat   795 MKCWDYKPENRPKFSDL 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 103/282 (37%)
FerNP_001382687.1 Important for interaction with membranes containing phosphoinositides. /evidence=ECO:0000250 1..300
F-BAR_Fer 5..238 CDD:153370
SH2_Fps_family 454..539 CDD:198224 6/36 (17%)
Protein Kinases, catalytic domain 567..817 CDD:473864 98/267 (37%)
Blue background indicates that the domain is not in the aligned region.

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