DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and Epha10

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_038965557.1 Gene:Epha10 / 298528 RGDID:1562679 Length:1061 Species:Rattus norvegicus


Alignment Length:347 Identity:94/347 - (27%)
Similarity:146/347 - (42%) Gaps:83/347 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 ELPRSHLVLGATLGEGAFGRVV-----MAEVNNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGR 469
            ||....:.|..:||.|.||.:.     :.......|||..::||.:|....|.:.|   ...:|:
  Rat   638 ELDAKSVTLEKSLGAGRFGDLCCGCLQLPGRQELPVAVHTLREGCSDSQKLSFLAE---ALTLGQ 699

  Fly   470 --HINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKD 532
              |.:|:.|.|..::..||.::.||...|.|.|||..:.                  |.::|.: 
  Rat   700 FDHSHIVRLEGVVTRGNPLMIVTEYMNLGALDDFLRHHE------------------AELVTAQ- 745

  Fly   533 LIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLA-RD---------------- 580
            |:.....:|..|.||:....:||.||||.||:|...:.||:.||.. ||                
  Rat   746 LMGLLPGLASAMKYLSEMGYVHRGLAARRVLLSSGLICKISGFGRGPRDRAEAVYTTMVRSSLLW 810

  Fly   581 ------------------------------------IQSTDYYRKNTNGRLPIKWMAPESLQEKF 609
                                                .|...:.|...:||.|..|.|||:||...
  Rat   811 PHMLLLLSAIPTGPMVYILALPPSLPGLFPLVVPCLSQPGSFLRCGGSGRSPALWAAPETLQFGH 875

  Fly   610 YDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFN 674
            :.|.|||||:||::||:|.:|::|| ..||.:::...:..|.|:..|..|...::.||.:||..:
  Rat   876 FSSASDVWSFGIVMWEVMAFGERPY-WDMSGQDVIKAVEDGFRLPPPRNCPSQLHRLMLECWQKD 939

  Fly   675 ADDRPPFTEIVEYMDKLLQTKE 696
            ..:||.|::|...:.|:.|..|
  Rat   940 PGERPRFSQIHSILSKMGQEPE 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 92/341 (27%)
Epha10XP_038965557.1 EphR_LBD 35..210 CDD:470656
fn3 339..431 CDD:394996
FN3 451..551 CDD:238020
EphA2_TM 569..641 CDD:464211 2/2 (100%)
Protein Kinases, catalytic domain 638..956 CDD:473864 91/340 (27%)
SAM_EPH-A10 982..1051 CDD:188948
Blue background indicates that the domain is not in the aligned region.

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