DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and Ddr1

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_037269.2 Gene:Ddr1 / 25678 RGDID:2252 Length:910 Species:Rattus norvegicus


Alignment Length:316 Identity:107/316 - (33%)
Similarity:164/316 - (51%) Gaps:38/316 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 ELPRSHLVLGATLGEGAFGRVVMAEVNN------------------AIVAVKMVKEGHTDDDIAS 456
            :.|||.|.....||||.||.|.:.||.:                  .:||||:::...|.:....
  Rat   601 DFPRSRLRFKEKLGEGQFGEVHLCEVEDPQDLVTSDFPISVQKGHPLLVAVKILRPDATKNARND 665

  Fly   457 LVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNR-----PFGRDQDRDS 516
            .::|:::|..: :..|||.|||.|.|:.||.:|.:|..:|:|..||..::     ..|...||:|
  Rat   666 FLKEVKIMSRL-KDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLENKVTQGLPGDRES 729

  Fly   517 SQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDI 581
            .|.|      .|:...|:....|||.||.|||:...:|||||.||.||.:::.:||||||::|::
  Rat   730 DQGP------TISYPMLLHVGAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNL 788

  Fly   582 QSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEI-MTYGQQPY------PTIMS 639
            .:.||||......|||:|||.|.:....:.:.||||::|:.|||: |....||:      ..|.:
  Rat   789 YAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRSQPFGQLTDEQVIEN 853

  Fly   640 AEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIVEYM-DKLLQT 694
            |.|.:........:.:|..|...:|.||.:||....:.||||:::..:: |..|.|
  Rat   854 AGEFFRDQGRQVYLSRPPACPQTLYELMLRCWSREPEQRPPFSQLHRFLADDALNT 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 105/312 (34%)
Ddr1NP_037269.2 FA58C 58..185 CDD:238014
DS-like domain. /evidence=ECO:0000250 193..368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 467..494
PPxY motif 478..481
PTKc_DDR1 601..904 CDD:133227 104/309 (34%)
Blue background indicates that the domain is not in the aligned region.

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