DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and EPHB3

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_004434.2 Gene:EPHB3 / 2049 HGNCID:3394 Length:998 Species:Homo sapiens


Alignment Length:671 Identity:169/671 - (25%)
Similarity:270/671 - (40%) Gaps:175/671 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 TRPSGSLLTLNCHALGNPEPNITWYR--NGTVDWT--------RGYGSLKRNRWTLTMEDLVPGD 168
            |.|:.|:.|  ||.        .:||  :.:.|..        ||..| ..|..:|.:|...|.|
Human   311 TSPAASICT--CHN--------NFYRADSDSADSACTTVPSPPRGVIS-NVNETSLILEWSEPRD 364

  Fly   169 CG-------NYTCKVCNSLG----CIRHDTQVIVSDRVNHKPILMTGPLNLT--------LVVNS 214
            .|       |..||.|:..|    |.|.|      |.|...|    ..|.||        |:.::
Human   365 LGGRDDLLYNVICKKCHGAGGASACSRCD------DNVEFVP----RQLGLTERRVHISHLLAHT 419

  Fly   215 TGSMHCKYLSDLTSKKAWIFVPCHGMTNCSNNRSIIAE---------------------DKDQ-- 256
            ..:...:.::.::.|..  ..|.:...|.:.|::..:|                     ::..  
Human   420 RYTFEVQAVNGVSGKSP--LPPRYAAVNITTNQAAPSEVPTLRLHSSSGSSLTLSWAPPERPNGV 482

  Fly   257 -LDFVNVRMEQ-EGWYTCVES--NSL---GQSNSTAYLRVVRSLHVLEAGVAS--GSLHSTS--- 309
             ||:.....|: ||..:.|.|  ||:   |......|:..||:..|...|..|  ....:||   
Human   483 ILDYEMKYFEKSEGIASTVTSQMNSVQLDGLRPDARYVVQVRARTVAGYGQYSRPAEFETTSERG 547

  Fly   310 -----------FVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEG 363
                       .:......||:|:....:.....:||.:|                         
Human   548 SGAQQLQEQLPLIVGSATAGLVFVVAVVVIAIVCLRKQRH------------------------- 587

  Fly   364 GGDS--SGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPR----SHLVLGATL 422
            |.||  :..:...|.|.:::...            ||. ||.|.::..|..:    |.:.:...:
Human   588 GSDSEYTEKLQQYIAPGMKVYID------------PFT-YEDPNEAVREFAKEIDVSCVKIEEVI 639

  Fly   423 GEGAFGRVVMAEV-----NNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGR--HINIINLLGCC 480
            |.|.||.|....:     ....||:|.:|.|:|:......:.|..:|   |:  |.|||.|.|..
Human   640 GAGEFGEVCRGRLKQPGRREVFVAIKTLKVGYTERQRRDFLSEASIM---GQFDHPNIIRLEGVV 701

  Fly   481 SQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMD 545
            :::.|:.::.|:..:..|..||..|         |..          .|...|:.....||.||.
Human   702 TKSRPVMILTEFMENCALDSFLRLN---------DGQ----------FTVIQLVGMLRGIAAGMK 747

  Fly   546 YLASRRCIHRDLAARNVLVSDDYVLKIADFGLAR---DIQSTDYYRKNTNGRLPIKWMAPESLQE 607
            ||:....:||||||||:||:.:.|.|::||||:|   |..|...|..:..|::||:|.|||::..
Human   748 YLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDPSDPTYTSSLGGKIPIRWTAPEAIAY 812

  Fly   608 KFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWH 672
            :.:.|.||||||||::||:|:||::|| ..||.:::...:....|:..|..|...::.||..||.
Human   813 RKFTSASDVWSYGIVMWEVMSYGERPY-WDMSNQDVINAVEQDYRLPPPMDCPTALHQLMLDCWV 876

  Fly   673 FNADDRPPFTEIVEYMDKLLQ 693
            .:.:.||.|::||..:|||::
Human   877 RDRNLRPKFSQIVNTLDKLIR 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 26/97 (27%)
Ig strand B 121..125 CDD:409353 1/3 (33%)
Ig strand C 134..138 CDD:409353 0/3 (0%)
Ig strand E 157..161 CDD:409353 1/3 (33%)
Ig strand F 171..176 CDD:409353 2/4 (50%)
Ig strand G 184..187 CDD:409353 1/2 (50%)
Ig 200..289 CDD:472250 20/126 (16%)
Ig strand B 216..220 CDD:409353 0/3 (0%)
Ig strand C 229..233 CDD:409353 1/3 (33%)
Ig strand E 255..259 CDD:409353 1/6 (17%)
Ig strand F 269..274 CDD:409353 0/4 (0%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 97/301 (32%)
EPHB3NP_004434.2 EphR_LBD_B3 39..211 CDD:198446
Ephrin_rec_like 272..316 CDD:429604 2/4 (50%)
fn3 341..436 CDD:394996 25/105 (24%)
FN3 <473..542 CDD:238020 16/68 (24%)
EphA2_TM 560..630 CDD:464211 17/107 (16%)
PTKc_EphR_B 628..896 CDD:173638 95/290 (33%)
SAM_superfamily 922..990 CDD:472832
Blue background indicates that the domain is not in the aligned region.

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