DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and old-2

DIOPT Version :9

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_496123.1 Gene:old-2 / 191738 WormBaseID:WBGene00003863 Length:498 Species:Caenorhabditis elegans


Alignment Length:518 Identity:149/518 - (28%)
Similarity:237/518 - (45%) Gaps:108/518 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 TCVESN-SLGQSNSTAYLRVVRSLHVLEAGVASGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIR 334
            :|...| :||::...::.||.|:....|.|.::             ...:|||.:.::||..||.
 Worm    18 SCYARNLTLGRNFEDSFKRVPRASEKNELGDSN-------------VQQIIFISLYSVFVALAIG 69

  Fly   335 KMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPF- 398
            .....|..|.:              |.:...:.|...:.::.|....||:|.:......||.|: 
 Worm    70 ICCLIKAYKSK--------------KRQLPANRSKGNEYLLEPTTADQKKRYSNNIVPPEPTPYP 120

  Fly   399 ---NEYEFPLD----SNWELPRS--------------------------HLVLGATLGEGAFGRV 430
               .|.:|...    ||.|.|..                          .:..|..||.|.||.:
 Worm   121 ITSGEDDFGKTPSRLSNEECPPELKLAPINDRIKYLHYYAEVEINEEDLDISKGRPLGSGEFGII 185

  Fly   431 VMA----------EVNNAI-VAVK--MVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQ 482
            ...          |..:.: ||||  :.:..|...::  :..|::||..:|:|.||:.|:|..:.
 Worm   186 RKGFLRSKNSKNKETESRLEVAVKSPLNEYNHIQQEL--IYDELKVMCAVGKHPNILALVGGITI 248

  Fly   483 NGPLYVIVEYAPHGNLKDFLYKN-RPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDY 546
            .....:|.|...:|:|..||.|| |.|..||   .:..|..|...::   ||:.||.|||:||:|
 Worm   249 GEKRMIISELVENGDLLSFLRKNRRNFTIDQ---LAFEPEKPSLGLV---DLVSFAFQIAKGMEY 307

  Fly   547 LASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYR-KNTNGRLPIKWMAPESLQEKFY 610
            |....|:|||||.||||:..:.|::||||||||..::.|||: ::.:..|||.||||||:.:..:
 Worm   308 LIHVPCVHRDLALRNVLIKGNMVIRIADFGLARRHKNKDYYKTQSVDTPLPIHWMAPESIDKLLF 372

  Fly   611 DSKSDVWSYGILLWEIMTYGQQPYPTIMSAEE-------LYTYLMSGQRMEKPAKCSMNIYILMR 668
            ..||||||||:.|:|:.:.|:.||..::..:|       :..||..|:|:.:||.....||.:|:
 Worm   373 TQKSDVWSYGVCLYELFSLGKSPYKNVIKYDERDSYCKYVLAYLNEGKRLAQPAHADAEIYNVMK 437

  Fly   669 QCWHFNADDRPPFTEIVEYMDKLLQT--KEDYLDVDIANLDTPPSTSDEEEDETDN---LQKW 726
            .||..:.:.|..|.:.:|:.:|.|:|  .|.:||:           :.:...||:|   |..|
 Worm   438 LCWDLDMNSRTTFLDCIEFFEKELKTTSNEYFLDL-----------TRKLRSETNNQLRLSNW 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 112..191 CDD:299845
IG_like 113..191 CDD:214653
IG_like 205..289 CDD:214653 4/18 (22%)
PKc_like 404..692 CDD:304357 110/339 (32%)
STYKc 416..688 CDD:214568 105/293 (36%)
old-2NP_496123.1 PTKc 175..458 CDD:270623 104/290 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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