DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and ver-3

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_509836.1 Gene:ver-3 / 181289 WormBaseID:WBGene00006896 Length:1227 Species:Caenorhabditis elegans


Alignment Length:721 Identity:177/721 - (24%)
Similarity:298/721 - (41%) Gaps:172/721 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 SSKPYWRNPKKMSFLQTRPSGSLLTLNC-HALGNPEPNITW-YRNGTVDWTRGYGSLKRNRWT-- 158
            |||.....|.|:.:     .|..:.|.| ..|.:.:.:::| :.|..   :....|:.....|  
 Worm   570 SSKATESEPSKIIY-----EGDNVKLTCVFPLDSDDWSVSWRFENSK---SSDISSIPTTTETEI 626

  Fly   159 --------LTMEDLVPGDCGNYTCKVCNSLGCIRHDTQVIVSDRVN----HKPILMTGPLNLTLV 211
                    |.:.|:.....|.|||.|.|      .|::.::...::    .||.:..|..|..::
 Worm   627 KQYSKHLILNLRDVTTSFTGTYTCVVKN------EDSEKLLETSIDVKAISKPSITGGNSNAVVI 685

  Fly   212 V----------NSTGSMHCKYLSDLTSKKAWIFVPCHGMTNCSNNRSIIAEDKDQLDFVNVRMEQ 266
            |          |.||:....|        .| |...:..|:...:.||:...:       .|.|.
 Worm   686 VDYDQYFEINCNMTGTPPPVY--------QW-FKDGNPYTHGDVDGSILRVSR-------ARGED 734

  Fly   267 EGWYTCVESNSLGQSNSTAYLRVVRSLHVLEAGVASGSLHSTSFVYIFVFGGLIFIFMTTLFVFY 331
            :|.:.|:.:|..|..        :.|:.|.......|||....|:.:.:...:|.:|:.|..:..
 Worm   735 DGEFHCLATNRAGDK--------LNSIEVQVNNAPKGSLFFYWFLALLLLISIIAVFLLTCKLRA 791

  Fly   332 AIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPA 396
            :.|..|.:.:   .:.|::                     :|||       |.:...|....:..
 Worm   792 SNRLTKQKDI---ALNTLY---------------------ETMI-------KHQAGPLPEEMKDL 825

  Fly   397 PFNE--YEFPLDSNWELPRSHLVLGATLGEGAFGRVV-----MAEVNNAI-------VAVKMVKE 447
            |..|  |..|.::::|:...:|.:...:|.|.||.|.     ||...:.|       ||||....
 Worm   826 PVEERTYYLPYNNDYEIDPVNLEILNPIGSGHFGVVKKGLLGMAYPKSKIESKTRLPVAVKSSTN 890

  Fly   448 GHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQN---GPLYVIVEYAPHGNLKDFLYKNR-PF 508
            ....:....:..|::||..|.::.|::.|:|..::|   |.||::.|:...|||::||..:| .|
 Worm   891 PFNVELQKMMAEELKVMCAIPKNPNVLALIGAVTKNMRQGQLYIVTEFIDGGNLREFLQAHRNTF 955

  Fly   509 GRDQDRDSSQP-------PPS----------------------PPAHVITEKDLIKFAHQIARGM 544
            ..:...|...|       |.|                      |.|  :...||:....|||:||
 Worm   956 INELVEDEHVPVDDSYLVPNSVKKKIYKFDEKLGEGTRLLVEDPDA--LCTSDLLSIGLQIAKGM 1018

  Fly   545 DYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYR--KNTNGRLPIKWMAPESLQE 607
            .:||...|:|||||.||||::...:::||||||::...:..|||  |:.:..||::||..|.::|
 Worm  1019 AWLADVPCVHRDLACRNVLITKTKIVRIADFGLSKKHTNKTYYRTKKSKDTPLPVRWMPLECIEE 1083

  Fly   608 KFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWH 672
            ..:..||||||:||.|:||.|.|..|||. .....:..::.:|.|.::|..|...||.||:.||.
 Worm  1084 FKFTQKSDVWSFGICLYEIFTLGGTPYPN-CDTFNVIEFIRNGNRNKQPEYCHDEIYELMKVCWQ 1147

  Fly   673 FNADDRPPF---------------TEIVEYMDKLLQTK-------EDYLD---VDIANLDTPPST 712
            ||..|||.|               ::.:|.::.:|.|:       :|::.   .|:.|:....|.
 Worm  1148 FNPKDRPTFNDCITFFENHMRDSSSQFLERVENMLHTEMQEQSKLDDWIQDSRPDVPNVSFQKSP 1212

  Fly   713 SDEEED 718
            ..::|:
 Worm  1213 KKQKEE 1218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 19/101 (19%)
Ig strand B 121..125 CDD:409353 1/3 (33%)
Ig strand C 134..138 CDD:409353 1/4 (25%)
Ig strand E 157..161 CDD:409353 2/13 (15%)
Ig strand F 171..176 CDD:409353 3/4 (75%)
Ig strand G 184..187 CDD:409353 0/2 (0%)
Ig 200..289 CDD:472250 18/98 (18%)
Ig strand B 216..220 CDD:409353 1/3 (33%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 0/3 (0%)
Ig strand F 269..274 CDD:409353 1/4 (25%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 108/349 (31%)
ver-3NP_509836.1 IG_like 242..>313 CDD:214653
IG_like 578..667 CDD:214653 19/102 (19%)
Ig strand B 588..592 CDD:409353 1/3 (33%)
Ig strand C 602..606 CDD:409353 0/3 (0%)
Ig strand E 633..637 CDD:409353 1/3 (33%)
Ig strand F 647..652 CDD:409353 3/4 (75%)
Ig_3 672..744 CDD:464046 18/87 (21%)
PTKc 851..1164 CDD:270623 104/315 (33%)
Blue background indicates that the domain is not in the aligned region.

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