DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and svh-2

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_509104.1 Gene:svh-2 / 180929 WormBaseID:WBGene00020504 Length:1086 Species:Caenorhabditis elegans


Alignment Length:689 Identity:154/689 - (22%)
Similarity:251/689 - (36%) Gaps:192/689 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 DLDDGAADDDDNKADLPVNVSSKPYWRN----PKKMSFLQTRPSGSLLT---------LNCHALG 129
            |:.|.........||:      :|:||.    ..|.|..:|:.:..|.|         ::|..| 
 Worm   439 DMSDVLRFSASESADI------RPHWRTNISVVGKFSITKTKENQLLYTTVEGLQSLDISCKGL- 496

  Fly   130 NPEPNITWYRNGTVDWTRGYGSLKRNRW--------TLTMEDLVPGDCGN---YTC--------K 175
              .||....|.|      |:.......|        |:|..::  ..|.|   :.|        |
 Worm   497 --YPNCQTLRQG------GWEDPLECSWCADDNAQRTITSSEV--SSCKNNLKHECPPSMRWIHK 551

  Fly   176 VCNSLGCIRHDTQVIVSDRVNHKPILMTGPLNLTLVVNSTGSMHCK--------------YLSDL 226
            ..|:.|.    |.|:...|....|.|.....|..:.|..:.|:.|.              :||.:
 Worm   552 YNNNSGF----TAVVDGFRALKNPKLNACGTNCVVTVVDSSSIQCDTNPDEVIGDSCKQVFLSGM 612

  Fly   227 TSKKAWIFVPCHGMTNCSNNRSIIAEDKDQLDFVNVRMEQE-----GWYTCVESNSLGQSNSTAY 286
            ...|.:.|...:..          |:...|.|..|.:::.:     ||.                
 Worm   613 IGDKNYSFPFDYQQ----------ADRGTQTDVKNSQVDDKKGSSPGWK---------------- 651

  Fly   287 LRVVRSLHVLEAGVASGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKV-----LKQRI 346
                                    :.|.:...:..|.:..:.|:|...:....|.     :.|||
 Worm   652 ------------------------IAIAIISVMTIILIVAIIVYYMRNRFPRIKTHVRPPIGQRI 692

  Fly   347 ETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWEL 411
            |..:..            |..:|             :|....:...|....|......|..:::.
 Worm   693 ENEYDM------------GHMAG-------------RQAQLAINGDNYVKVFRSMRPDLKVDFKN 732

  Fly   412 PRSHLVLGATLGEGAFGRVVMAEVN-----NAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHI 471
            .|...:  ..:|:|.:|.|..|..:     ...|..|.:|||    .|:....|...|.... |.
 Worm   733 LRVDKL--DPIGQGHYGVVYKAMYSPSKSLEEKVVCKYLKEG----KISEFYEEARTMSEFD-HP 790

  Fly   472 NIINLLGCC---SQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDL 533
            ||:.|:|..   |.:.|: :|.||...|:||.|:                   ....:.|..:||
 Worm   791 NILKLIGVALDDSSHLPI-IITEYMAKGDLKSFI-------------------ENVENTIKMRDL 835

  Fly   534 IKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQ-STDYYRKNTNGRLPI 597
            .:||..||:||:|:.|::.||||||.||.|:.:...:|||||||.|.:. .|:.|.:.....||:
 Worm   836 FEFAFDIAKGMNYMHSKKFIHRDLACRNCLLDEHLRVKIADFGLCRKVDIETELYVQMHERDLPV 900

  Fly   598 KWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQ--RMEKPAKCS 660
            :|..|| :.|:.:...||:||:|:::||:.|.|..||..:.|...:..:|...:  |:.||..|.
 Worm   901 RWFPPE-ISEQGFGITSDIWSFGVVIWELFTRGSTPYSNMASWILILPWLKESETNRLRKPPYCP 964

  Fly   661 MNIYI-LMRQCWHFNADDRPPFTEIVEYMDKLLQTKEDY 698
            ..:|. :|..||..|..:||.|:::|..:..:::..|.|
 Worm   965 EKLYTDVMLACWKANPAERPQFSDLVTIIPNVVKYMEGY 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 26/121 (21%)
Ig strand B 121..125 CDD:409353 1/12 (8%)
Ig strand C 134..138 CDD:409353 1/3 (33%)
Ig strand E 157..161 CDD:409353 2/11 (18%)
Ig strand F 171..176 CDD:409353 2/15 (13%)
Ig strand G 184..187 CDD:409353 0/2 (0%)
Ig 200..289 CDD:472250 15/107 (14%)
Ig strand B 216..220 CDD:409353 1/3 (33%)
Ig strand C 229..233 CDD:409353 1/3 (33%)
Ig strand E 255..259 CDD:409353 1/3 (33%)
Ig strand F 269..274 CDD:409353 1/4 (25%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 91/299 (30%)
svh-2NP_509104.1 TyrKc 735..993 CDD:197581 89/285 (31%)

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