DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and hir-1

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_504458.1 Gene:hir-1 / 178936 WormBaseID:WBGene00016059 Length:903 Species:Caenorhabditis elegans


Alignment Length:840 Identity:190/840 - (22%)
Similarity:324/840 - (38%) Gaps:245/840 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 WQP---AVQVEGRRQMANSQEMIKDHLGARSQNKTPAITNNANQSSTSSADLDDGAADDD---DN 89
            |.|   ||......:..||:....|.. ..::.:|..::...|....|..::...|..:|   :.
 Worm   100 WSPVPGAVMYYIGYRTLNSKTFTSDDF-VITEKQTVDLSTLTNIDPCSELEVAVAAFSEDGIGNE 163

  Fly    90 KADLPVNVSSKPYWRNPK----KMSFLQTRPSGSLLTLNC------------------------- 125
            ..:|.:: |.|| ..|||    ::.:|.|.........|.                         
 Worm   164 SKELKIS-SPKP-TANPKLDLLELQYLNTTLVSDFYQANATVHVEFRYKTDPWFLGPDDLDVQPL 226

  Fly   126 -HALGNPEPNIT----------WYRNGTVDWTRGYGSLKRN-RWTLTMEDLVPGDCGNYT----- 173
             |.:...:|:::          ..:|.|:..:.|...:.|. |:...::.::...|...|     
 Worm   227 FHLISCVDPDLSQGIPVPDFDVHVKNSTISTSIGSDMMDRKCRYVYYLQSVMSKKCNTMTEMPSP 291

  Fly   174 -----------CKVCNSLGCIRHDT--------------QVIVSDRVNHKPILMTGPLNLTLV-V 212
                       |.:..:..|::..:              .|:..||.|.........:|:|.: |
 Worm   292 PSSALQTIQVECDIVKNAPCVKVPSYQPPLCGMVENVAFSVLSRDRENLNDPASNLTVNVTFIPV 356

  Fly   213 NSTGSMHCKY-------LSDLTSKKAWIFV------------PCHGMTNCSN------NRSII-- 250
            .....|...|       .|:..:|:...|:            .|.|..:..|      ||||:  
 Worm   357 TRNNEMPTLYYIGIFGTASEYHTKEEETFLGVNITHVIGKESSCTGFDSSGNCLAENLNRSIVLQ 421

  Fly   251 --------------AEDKDQLDFVNVRMEQEGWYTCVESNSLGQSNSTAYLRVVRSLHVLEAGVA 301
                          .:|...|...:|.::.:.:....:...|                     ||
 Worm   422 GIHPKTLYGLTICAVKDIRNLTLPDVTLDSKSFRAKADRIML---------------------VA 465

  Fly   302 SGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGD 366
            ..|.:....:...|.|.|:.|.:..:.:::..||.......|.::|.|               |.
 Worm   466 HTSNNPVGMIIGIVIGSLVVILVAIVVIWFYFRKKSENMKFKFQMEQV---------------GK 515

  Fly   367 SSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEY-EFPL----DSNWELPRSHLVL--GATLGE 424
            ::                             .|.| :||:    :..||:.|.:|::  ...||.
 Worm   516 NN-----------------------------MNRYIDFPIMAAKNDIWEIERRNLIIHNDKKLGS 551

  Fly   425 GAFGRVVMAEV---------------------NNAIVAVKMVKEGHTDDDIASLVREMEVMKIIG 468
            ||||.|.:.::                     .|..|||||:.|...:......:||:.:||.:|
 Worm   552 GAFGAVYLGKLIGKSLAHKDANSPLGINLMRAENCQVAVKMLPEYADEMSKHEFLREIALMKTLG 616

  Fly   469 RHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFL----------------YKNRPFGRDQDRDSS 517
            .|..::|:|.|.:::.||.::|||..:|:|..||                |.:.|...:.|.:. 
 Worm   617 YHERLVNMLACVTESEPLCLVVEYCDNGDLLKFLRERCKYMMKLDDLGINYHDPPENENYDTNM- 680

  Fly   518 QPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQ 582
                     ::|.|.|::||.||:.|::||:.:..:|||:|||||||.:....||.||||.|.|.
 Worm   681 ---------IVTLKQLLQFAVQISYGLEYLSQKGFVHRDVAARNVLVHEGTACKIGDFGLCRYIY 736

  Fly   583 STDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYL 647
            :.....|:..|:||:|||:||:::...:..|||:||:||||:|::|.|..|||. |..|::..:|
 Worm   737 ADQSQYKSKGGKLPLKWMSPEAIRHYEFSIKSDIWSFGILLFEVITLGGSPYPG-MPPEDVLPFL 800

  Fly   648 MSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEI-VEYMDKLLQTKED--YLDVDIA 704
            ..|.|:|||..|..|.|.:|.|||:.:.|||..|::: ::...:|....||  ||.:|.|
 Worm   801 EGGGRIEKPDNCPENFYDVMMQCWNADPDDRIEFSDVRMQLATQLEDITEDYSYLKLDAA 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 19/160 (12%)
Ig strand B 121..125 CDD:409353 0/3 (0%)
Ig strand C 134..138 CDD:409353 0/13 (0%)
Ig strand E 157..161 CDD:409353 0/3 (0%)
Ig strand F 171..176 CDD:409353 2/20 (10%)
Ig strand G 184..187 CDD:409353 0/2 (0%)
Ig 200..289 CDD:472250 19/130 (15%)
Ig strand B 216..220 CDD:409353 1/3 (33%)
Ig strand C 229..233 CDD:409353 1/3 (33%)
Ig strand E 255..259 CDD:409353 1/3 (33%)
Ig strand F 269..274 CDD:409353 0/4 (0%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 111/331 (34%)
hir-1NP_504458.1 fn3 85..164 CDD:394996 12/64 (19%)
RGP 227..>281 CDD:385243 7/53 (13%)
PTKc 547..842 CDD:270623 106/305 (35%)

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