DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and hir-1

DIOPT Version :9

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_504458.1 Gene:hir-1 / 178936 WormBaseID:WBGene00016059 Length:903 Species:Caenorhabditis elegans


Alignment Length:831 Identity:191/831 - (22%)
Similarity:325/831 - (39%) Gaps:227/831 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 WQP---AVQVEGRRQMANSQEMIKDHLGARSQNKTPAITNNANQSSTSSADLDDGAADDD---DN 89
            |.|   ||......:..||:....|.. ..::.:|..::...|....|..::...|..:|   :.
 Worm   100 WSPVPGAVMYYIGYRTLNSKTFTSDDF-VITEKQTVDLSTLTNIDPCSELEVAVAAFSEDGIGNE 163

  Fly    90 KADLPVNVSSKPYWRNPK----KMSFLQTRPSGSLLTLNC------------------------- 125
            ..:|.:: |.|| ..|||    ::.:|.|.........|.                         
 Worm   164 SKELKIS-SPKP-TANPKLDLLELQYLNTTLVSDFYQANATVHVEFRYKTDPWFLGPDDLDVQPL 226

  Fly   126 -HALGNPEPNIT----------WYRNGTVDWTRGYGSLKRN-RWTLTMEDLVPGDCGNYT----- 173
             |.:...:|:::          ..:|.|:..:.|...:.|. |:...::.::...|...|     
 Worm   227 FHLISCVDPDLSQGIPVPDFDVHVKNSTISTSIGSDMMDRKCRYVYYLQSVMSKKCNTMTEMPSP 291

  Fly   174 -----------CKVCNSLGCIRHDT--------------QVIVSDRVNHKPILMTGPLNLTLV-V 212
                       |.:..:..|::..:              .|:..||.|.........:|:|.: |
 Worm   292 PSSALQTIQVECDIVKNAPCVKVPSYQPPLCGMVENVAFSVLSRDRENLNDPASNLTVNVTFIPV 356

  Fly   213 NSTGSMHCKY-------LSDLTSKKAWIFV------------PCHGMTNCSN------NRSII-- 250
            .....|...|       .|:..:|:...|:            .|.|..:..|      ||||:  
 Worm   357 TRNNEMPTLYYIGIFGTASEYHTKEEETFLGVNITHVIGKESSCTGFDSSGNCLAENLNRSIVLQ 421

  Fly   251 --------------AEDKDQLDFVNVRMEQEGWYTCVESNSLGQSNSTAYLRVVRSLHVLEAGVA 301
                          .:|...|...:|.::.:.:....:...|                     ||
 Worm   422 GIHPKTLYGLTICAVKDIRNLTLPDVTLDSKSFRAKADRIML---------------------VA 465

  Fly   302 SGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGD 366
            ..|.:....:...|.|.|:.|.:..:.:::..||.......|.::|.|               |.
 Worm   466 HTSNNPVGMIIGIVIGSLVVILVAIVVIWFYFRKKSENMKFKFQMEQV---------------GK 515

  Fly   367 SSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEY-EFPL----DSNWELPRSHLVL--GATLGE 424
            ::                             .|.| :||:    :..||:.|.:|::  ...||.
 Worm   516 NN-----------------------------MNRYIDFPIMAAKNDIWEIERRNLIIHNDKKLGS 551

  Fly   425 GAFGRVVMAEV---------------------NNAIVAVKMVKEGHTDDDIASLVREMEVMKIIG 468
            ||||.|.:.::                     .|..|||||:.|...:......:||:.:||.:|
 Worm   552 GAFGAVYLGKLIGKSLAHKDANSPLGINLMRAENCQVAVKMLPEYADEMSKHEFLREIALMKTLG 616

  Fly   469 RHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAH------- 526
            .|..::|:|.|.:::.||.::|||..:|:|..||.:...:....| |.......||.:       
 Worm   617 YHERLVNMLACVTESEPLCLVVEYCDNGDLLKFLRERCKYMMKLD-DLGINYHDPPENENYDTNM 680

  Fly   527 VITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNT 591
            ::|.|.|::||.||:.|::||:.:..:|||:|||||||.:....||.||||.|.|.:.....|:.
 Worm   681 IVTLKQLLQFAVQISYGLEYLSQKGFVHRDVAARNVLVHEGTACKIGDFGLCRYIYADQSQYKSK 745

  Fly   592 NGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKP 656
            .|:||:|||:||:::...:..|||:||:||||:|::|.|..|||. |..|::..:|..|.|:|||
 Worm   746 GGKLPLKWMSPEAIRHYEFSIKSDIWSFGILLFEVITLGGSPYPG-MPPEDVLPFLEGGGRIEKP 809

  Fly   657 AKCSMNIYILMRQCWHFNADDRPPFTEI-VEYMDKLLQTKED--YLDVDIA 704
            ..|..|.|.:|.|||:.:.|||..|::: ::...:|....||  ||.:|.|
 Worm   810 DNCPENFYDVMMQCWNADPDDRIEFSDVRMQLATQLEDITEDYSYLKLDAA 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 112..191 CDD:299845 15/145 (10%)
IG_like 113..191 CDD:214653 14/144 (10%)
IG_like 205..289 CDD:214653 19/125 (15%)
PKc_like 404..692 CDD:304357 112/322 (35%)
STYKc 416..688 CDD:214568 108/302 (36%)
hir-1NP_504458.1 fn3 85..163 CDD:365830 12/63 (19%)
PTKc 547..842 CDD:270623 107/296 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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