DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and C55C3.4

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_500846.1 Gene:C55C3.4 / 177346 WormBaseID:WBGene00016954 Length:431 Species:Caenorhabditis elegans


Alignment Length:378 Identity:107/378 - (28%)
Similarity:171/378 - (45%) Gaps:82/378 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 YAIRKMKHEKVLKQR------IETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVL 389
            :.:|:..| ||...:      ||.|:.:     :...|......|::..::...|..||      
 Worm    61 FVVREADH-KVYVDKIGFPTIIELVNHY-----VSTKESFSTKDGTVKVVLKHAVERQK------ 113

  Fly   390 QNGNEPAPFNEYEFPLDSNWELPRSHLVLGATLGEGAFG--------RVVMAEVNNAIVAVKMVK 446
                               |||....:.|...|||||||        :::.|.....:||||..|
 Worm   114 -------------------WELYHEDVELTKKLGEGAFGEVWKGKLLKILDANHQPVLVAVKTAK 159

  Fly   447 -EGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGR 510
             |..|.:.|..::||..:|:.:. |||::...|..:...|||||:|.|..|.|...|.|      
 Worm   160 LESMTKEQIKEIMREARLMRNLD-HINVVKFFGVAAGTEPLYVIMELADGGALDSALGK------ 217

  Fly   511 DQDRDSSQPPPSPPAH--VITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIA 573
                          .|  :|.:.:||   :|.|.|:.|:..:..:|||:||||.|.....| |||
 Worm   218 --------------LHFPMIKKYELI---YQAANGLAYIHEKNLMHRDVAARNCLYGGGQV-KIA 264

  Fly   574 DFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIM 638
            ||||:|  :..| |..:...::||:|:.||:::...|..|:||:::|::.|||...|::|||. .
 Worm   265 DFGLSR--EGAD-YTMDLKKKVPIRWLPPETIRSGLYTPKTDVFAFGVMAWEITEDGKEPYPG-F 325

  Fly   639 SAEELYTYLMSGQRMEKPAKCSMN---IYILMRQCWHFNADDRPPFTEIVEYM 688
            ...|:...::.|.||  |....:|   ...::.:||....:||.|..:|.::|
 Worm   326 KVIEVAMKVLQGYRM--PFSPEVNKEFAEFILTKCWPEKYEDRLPMKDICKWM 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 95/299 (32%)
C55C3.4NP_500846.1 SH2_Fps_family 4..93 CDD:198224 7/37 (19%)
TyrKc 121..376 CDD:197581 91/285 (32%)
Blue background indicates that the domain is not in the aligned region.

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