DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and src-2

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_493502.1 Gene:src-2 / 173296 WormBaseID:WBGene00005078 Length:507 Species:Caenorhabditis elegans


Alignment Length:382 Identity:125/382 - (32%)
Similarity:189/382 - (49%) Gaps:61/382 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 YAIRKMKHEK--VLKQR-IETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNG 392
            |.||::.|..  :.::| ..|:|.   .:..::.|    :.|....:..|..:.:..:||.    
 Worm   173 YRIRQLDHGGYFIARRRPFATLHD---LIAHYQRE----ADGLCVNLGAPCAKSEAPQTTT---- 226

  Fly   393 NEPAPFNEYEFPLDSNWELPRSHLVLGATLGEGAFGRVVMAEVN-NAIVAVKMVKEGHTDDDIAS 456
                      |..|..||:.|..:.|...:|.|.||.|.....| |..||||.:|.|..|.  ..
 Worm   227 ----------FTYDDQWEVDRRSVRLIRQIGAGQFGEVWEGRWNVNVPVAVKKLKAGTADP--TD 279

  Fly   457 LVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPP 521
            .:.|.::||.: ||..:::|...|:::.|:.::.|.... ||..||.:       :.|....|  
 Worm   280 FLAEAQIMKKL-RHPKLLSLYAVCTRDEPILIVTELMQE-NLLTFLQR-------RGRQCQMP-- 333

  Fly   522 SPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDY 586
                      .|::.:.|:|.||.||.....|||||||||:|:::...:|||||||||.:...:.
 Worm   334 ----------QLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGLARILMKENE 388

  Fly   587 YRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQ 651
            |...|..|.||||.|||:.....:.:||||||:||||.||:|:|:.|||.:.:||.| ..:.:|.
 Worm   389 YEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEVL-QQVDAGY 452

  Fly   652 RMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIVEYMDKLLQTKEDYLDVDIANLDT 708
            ||..||.|.:.:|.:|:|||..:.|.||.|        :.||.|.:    |:.|||:
 Worm   453 RMPCPAGCPVTLYDIMQQCWRSDPDKRPTF--------ETLQWKLE----DLFNLDS 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 105/288 (36%)
src-2NP_493502.1 SH3_Src_like 61..112 CDD:212779
SH2_Src_Src42 120..215 CDD:198233 9/48 (19%)
PTKc_Frk_like 231..496 CDD:270653 109/300 (36%)
Blue background indicates that the domain is not in the aligned region.

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