DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and src-1

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001364829.1 Gene:src-1 / 171722 WormBaseID:WBGene00005077 Length:537 Species:Caenorhabditis elegans


Alignment Length:312 Identity:118/312 - (37%)
Similarity:161/312 - (51%) Gaps:41/312 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   408 NWELPRSHLVLGATLGEGAFGRVVMAEVNNAI-VAVKMVKEGHTDDDIASLVREMEVMKIIGRHI 471
            |||:||:.|.|...||:|.||.|...:....: ||:|.:|.|....:  :.::|.::||... |.
 Worm   258 NWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMKPGTMSPE--AFLQEAQIMKQCD-HP 319

  Fly   472 NIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKF 536
            |::.|...|::..|.|:|.||..:|:|..:|          ..|.|         .:..:.|:..
 Worm   320 NLVKLYAVCTREEPFYIITEYMINGSLLQYL----------RTDGS---------TLGIQALVDM 365

  Fly   537 AHQIARGMDYLASRRCIHRDLAARNVLVSDDY----VLKIADFGLARDIQSTDYYRKNTNGRLPI 597
            |.|||.||.||..|:.:|||||||||||.|..    |:|:|||||||.:...|.|...|..:.||
 Worm   366 AAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEARTGAKFPI 430

  Fly   598 KWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMN 662
            ||.|||:.....:..|||||||||||:||||.||.|||. |...|:...:..|.||..|..|...
 Worm   431 KWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPG-MHNREVVEQVELGYRMPMPRGCPEQ 494

  Fly   663 IY--ILMRQCWHFNADDRPPFTEIVEYMDK-LLQTKEDYLDVDIANLDTPPS 711
            ||  :|:: ||....|.||.|..:..:.|. .:.|:.:|         .|||
 Worm   495 IYEEVLLK-CWDKTPDRRPTFDTLYHFFDDYFVSTQPNY---------APPS 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 113/291 (39%)
src-1NP_001364829.1 SH3_Src_like 79..130 CDD:212779
SH2_Src_family 138..240 CDD:199827
PTKc_Src_like 270..522 CDD:270630 105/275 (38%)
Blue background indicates that the domain is not in the aligned region.

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