DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and Ltk

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_976220.2 Gene:Ltk / 17005 MGIID:96840 Length:888 Species:Mus musculus


Alignment Length:563 Identity:150/563 - (26%)
Similarity:233/563 - (41%) Gaps:127/563 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 TLVVNSTGSMHCKYLSDLTSKKAWIFVPCHGMTNCSNNRSIIAEDKDQLDFVNVRMEQEGW---Y 270
            |..|:.:|.:   ||..|...:....|......|||:           ..|.:.:.:.|.|   .
Mouse   347 TSFVHPSGEL---YLQPLAVTEGHGEVEIRKHPNCSH-----------CPFKDCQWQAELWTAEC 397

  Fly   271 TCVESNSLGQSNSTAYLRVVRSLHVLEAGVASGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIRK 335
            ||.|...|...|.|..                 .|.:|:...| :.|.::.....:|.:..|:..
Mouse   398 TCPEGTELAVDNVTCM-----------------DLPTTASPLI-LMGAVVAALALSLLMMCAVLI 444

  Fly   336 MKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGSMDTMIM-PVVRIQKQRTTVLQNGNEP---- 395
            :.::|                          ..|...|.:. |.:.:.|.|::.::....|    
Mouse   445 LVNQK--------------------------CQGLWGTRLPGPELELSKLRSSAIRTAPNPYYCQ 483

  Fly   396 ---APFNEYEFPLDSNWELPRSHLVLGATLGEGAFGRV-------VMAEVNNAIVAVKMVKE--G 448
               :|...:..| ....|:..:::.|...||.||||.|       :..:.:...||:|.:.|  .
Mouse   484 VGLSPAQPWPLP-PGLTEVSPANVTLLRALGHGAFGEVYEGLVTGLPGDSSPLPVAIKTLPELCS 547

  Fly   449 HTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQD 513
            | .|::..|:..:.:.|.  .|.||:..:|...::.|..:::|....|::|.||..:||      
Mouse   548 H-QDELDFLMEALIISKF--SHQNIVRCVGLSFRSAPRLILLELMSGGDMKSFLRHSRP------ 603

  Fly   514 RDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVS---DDYVLKIADF 575
                .|....|   :|.:||::.|..||:|..||.....||||:||||.|:|   ...|.||.||
Mouse   604 ----HPGQLAP---LTMQDLLQLAQDIAQGCHYLEENHFIHRDIAARNCLLSCSGASRVAKIGDF 661

  Fly   576 GLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSA 640
            |:||||....||||.....||:|||.||:|.|..:.||:|.||:|:|||||.:.|..|||. .:.
Mouse   662 GMARDIYQASYYRKGGRTLLPVKWMPPEALLEGLFTSKTDSWSFGVLLWEIFSLGYMPYPG-HTN 725

  Fly   641 EELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIVEYMDKLLQTKEDYLDVDIAN 705
            :|:..::.:|.||:.|..|...:|.:|.|||....:.||.|..|:|.:....|      |.|:.|
Mouse   726 QEVLDFIATGNRMDPPRNCPGPVYRIMTQCWQHQPELRPDFGSILERIQYCTQ------DPDVLN 784

  Fly   706 LDTP----PSTSDEE------------------EDETDNLQKW 726
            ...|    |...:||                  |..:.||:.|
Mouse   785 SPLPVEPGPILEEEEASRLGNRSLEGLRSPKPLELSSQNLKSW 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250 19/82 (23%)
Ig strand B 216..220 CDD:409353 1/3 (33%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 0/3 (0%)
Ig strand F 269..274 CDD:409353 3/7 (43%)
Ig strand G 282..285 CDD:409353 1/2 (50%)
Protein Kinases, catalytic domain 404..692 CDD:473864 105/299 (35%)
LtkNP_976220.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..294
PTKc_ALK_LTK 499..775 CDD:270632 104/292 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 857..888
Blue background indicates that the domain is not in the aligned region.

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