DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and Kdr

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_034742.2 Gene:Kdr / 16542 MGIID:96683 Length:1345 Species:Mus musculus


Alignment Length:812 Identity:233/812 - (28%)
Similarity:347/812 - (42%) Gaps:208/812 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 WQPAVQVEGRRQMANSQEMIKDHLG-ARSQNKTPA--ITNNANQSSTSSADLDDGAADDDDNKAD 92
            |:.....:|    .|..|:.|:... ...:|||.:  :...||.|:....:.        .|||.
Mouse   483 WRHVEDFQG----GNKIEVTKNQYALIEGKNKTVSTLVIQAANVSALYKCEA--------INKAG 535

  Fly    93 LPVNVSSKPYWRNPKKMSFLQTRPSG-----SLLTLNCHALGNPEPNITWYRNG----TVDWTRG 148
            ....|.|....|.|:    :..:|:.     ..::|.|.|..|...|:|||:.|    :|.....
Mouse   536 RGERVISFHVIRGPE----ITVQPAAQPTEQESVSLLCTADRNTFENLTWYKLGSQATSVHMGES 596

  Fly   149 YGSLKRN---RWTL--------TMEDLVPG-------DCGNYTCKVCNSLGCIRH--DTQVIVSD 193
            ...:.:|   .|.|        |.:.|:..       |.|:|.|...:.....||  ..|:|:.:
Mouse   597 LTPVCKNLDALWKLNGTMFSNSTNDILIVAFQNASLQDQGDYVCSAQDKKTKKRHCLVKQLIILE 661

  Fly   194 RVNHKPILMTGPL-NLTLVVNSTGSMHCKYLSDLTSKKAWI-----FVPCHGMTNCSNNRSIIAE 252
            |:  .| ::||.| |.|..:..|..:.|....:.|....|.     .|...|:.....||:    
Mouse   662 RM--AP-MITGNLENQTTTIGETIEVTCPASGNPTPHITWFKDNETLVEDSGIVLRDGNRN---- 719

  Fly   253 DKDQLDFVNVRMEQEGWYTCVESNSLGQSNSTAYLRVVRSLHVLEAGVASGSLHSTSFVYIFVFG 317
                |....||.|..|.|||...|.||.:.:       .:|.::|     |:...|:...|.:.|
Mouse   720 ----LTIRRVRKEDGGLYTCQACNVLGCARA-------ETLFIIE-----GAQEKTNLEVIILVG 768

  Fly   318 GLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQ 382
            ..:......|.:...:|.:|..                           :.|.:.|..:.:|   
Mouse   769 TAVIAMFFWLLLVIVLRTVKRA---------------------------NEGELKTGYLSIV--- 803

  Fly   383 KQRTTVLQNGNEPAPFNEYEFPLD----------SNWELPRSHLVLGATLGEGAFGRVVMAE--- 434
                           .:..|.|||          |.||.||..|.||..||.||||:|:.|:   
Mouse   804 ---------------MDPDELPLDERCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFG 853

  Fly   435 ----VNNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQ-NGPLYVIVEYAP 494
                .....|||||:|||.|..:..:|:.|::::..||.|:|::||||.|:: .|||.||||:..
Mouse   854 IDKTATCKTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 918

  Fly   495 HGNLKDFL---------YKNRPFGRDQDRD-----------------SSQPPPSPPAHVITEKD- 532
            .|||..:|         ||::.....|.:|                 |||  .|..:..:.||. 
Mouse   919 FGNLSTYLRGKRNEFVPYKSKGARFRQGKDYVGELSVDLKRRLDSITSSQ--SSASSGFVEEKSL 981

  Fly   533 ---------------------LIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFG 576
                                 ||.::.|:|:||::||||:||||||||||:|:|:..|:||.|||
Mouse   982 SDVEEEEASEELYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 1046

  Fly   577 LARDI-QSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSA 640
            ||||| :..||.||. :.|||:||||||::.::.|..:|||||:|:|||||.:.|..|||.:...
Mouse  1047 LARDIYKDPDYVRKG-DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 1110

  Fly   641 EELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIVEYMDKLLQTK-----EDYLD 700
            ||....|..|.||..|...:..:|..|..|||.:.:.||.|:|:||::..|||..     :||:.
Mouse  1111 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHEDPNQRPSFSELVEHLGNLLQANAQQDGKDYIV 1175

  Fly   701 VDIA-----------NLDTPPSTSDEEEDETD 721
            :.::           :|.|.|.:..|||:..|
Mouse  1176 LPMSETLSMEEDSGLSLPTSPVSCMEEEEVCD 1207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 25/118 (21%)
Ig strand B 121..125 CDD:409353 1/3 (33%)
Ig strand C 134..138 CDD:409353 2/3 (67%)
Ig strand E 157..161 CDD:409353 2/11 (18%)
Ig strand F 171..176 CDD:409353 2/4 (50%)
Ig strand G 184..187 CDD:409353 2/4 (50%)
Ig 200..289 CDD:472250 24/94 (26%)
Ig strand B 216..220 CDD:409353 0/3 (0%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 1/3 (33%)
Ig strand F 269..274 CDD:409353 3/4 (75%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 140/354 (40%)
KdrNP_034742.2 Ig 226..327 CDD:472250
Ig strand B 244..248 CDD:409353
Ig strand C 259..263 CDD:409353
Ig strand E 292..296 CDD:409353
Ig strand F 306..311 CDD:409353
Ig strand G 319..322 CDD:409353
Ig 331..419 CDD:472250
Ig strand B 350..354 CDD:409353
Ig strand C 363..367 CDD:409353
Ig strand E 383..387 CDD:409353
Ig strand F 397..402 CDD:409353
Ig strand G 412..415 CDD:409353
Ig_3 549..642 CDD:464046 21/96 (22%)
I-set 665..742 CDD:400151 23/85 (27%)
Ig strand B 682..686 CDD:409353 0/3 (0%)
Ig strand C 695..699 CDD:409353 0/3 (0%)
Ig strand E 718..722 CDD:409353 2/11 (18%)
Ig strand F 732..737 CDD:409353 3/4 (75%)
VEGFR-2_TMD 757..791 CDD:375470 6/60 (10%)
PTKc_VEGFR2 824..1165 CDD:270681 139/343 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1272..1316
Blue background indicates that the domain is not in the aligned region.

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