DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and Csk

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_061501935.1 Gene:Csk / 1278803 VectorBaseID:AGAMI1_000696 Length:1254 Species:Anopheles gambiae


Alignment Length:712 Identity:193/712 - (27%)
Similarity:287/712 - (40%) Gaps:198/712 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLSIWQPAVQVEGRR--QMANSQEMIKDHLGARSQNKTPAITNNANQSSTSSADLDDGAADDDDN 89
            |.||..|..|:...:  |....|..|..|...  |:..|...|..:....:||.|.         
Mosquito   670 LSSIHHPVQQLVAPQSAQQQPHQPPIPPHPAV--QHHIPKSPNQHHPPQPASAVLQ--------- 723

  Fly    90 KADLPVNVSSKPYWRNPKKMSFLQTRPSGSLLTLNCH---------ALGNPEPNITWYRNGTVDW 145
                          .||:..|.:    .|.:||.|.|         |.|.|...:|         
Mosquito   724 --------------HNPQAASAV----GGGVLTNNSHHTTGPPSTGAGGPPVAPVT--------- 761

  Fly   146 TRGYGSLKRNRWTLTMED-------LVPGDCGNYTCKVCNSLGCIRHDTQ--------VIVSDRV 195
                ||...|..:.:|..       |.|  .|..|    .|...|....|        |..:..|
Mosquito   762 ----GSAAANMMSTSMNSAQLQGHILQP--VGGLT----GSALSIHQQQQQQQQQSAMVQGNQPV 816

  Fly   196 NHKPILMTGPLNLTLVV---------NSTGSMHCKYLSDLTSKKAWIFVPCHGMTNCSNNRSIIA 251
            :|....:.||:.|..||         |..|.          ....|..||. |:::.:.:.:..|
Mosquito   817 HHMSNSLHGPIGLPTVVVPPAGHDGSNGVGG----------PAPGWNCVPV-GLSSPTTSAAAAA 870

  Fly   252 EDKDQLDFVNVRMEQEGWY----TCVESNSLGQSNSTAYLRVVRSLHVLEAGVASGSLHSTSFVY 312
            :.:.:   ||.::....|:    ...|:.||.:..... |.:||              .||:|..
Mosquito   871 QRRAE---VNAKLNAMPWFHGRIKREEAESLLKPREDG-LFLVR--------------ESTNFPG 917

  Fly   313 IFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGG-----------D 366
            .:           ||.|.:      :|||...||:.|   ..|:.|...|...           |
Mosquito   918 DY-----------TLCVCF------NEKVEHYRIKYV---DNKLTIDDDEYFDHLGQLVEHYTLD 962

  Fly   367 SSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEY---EFPLDSNWELPRSHLVLGATLGEGAFG 428
            |.| :.|.:|..:                 |..|:   :|. |:.||:....|.|...:|:|.||
Mosquito   963 SDG-LCTKLMKAL-----------------PKEEFCVKDFQ-DNGWEIKMEDLQLKENIGKGEFG 1008

  Fly   429 RVVMAEVNNAIVAVKMVKE-GHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEY 492
            .|::..:....||||::|: |...:   ..:.|..||..: .|.|::..:|....:..:|::.||
Mosquito  1009 DVMLGIMKGEKVAVKVLKDAGRASN---KFLAEAGVMTTL-EHENLVKFIGLVFHDKYIYLVTEY 1069

  Fly   493 APHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDL 557
            ...|:|.|:|   |..||..               |:.||.|.||:....||:||.:::.|||||
Mosquito  1070 MSKGSLVDYL---RSRGRQH---------------ISRKDQINFAYDTCCGMEYLETKKVIHRDL 1116

  Fly   558 AARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGIL 622
            ||||||:|:|.|.|::|||||||.:.|     ..:.:|||||.|||:|:|..:.:|:|:||:|||
Mosquito  1117 AARNVLISEDCVAKVSDFGLARDERYT-----GDSSKLPIKWTAPEALKEGKFSNKTDMWSFGIL 1176

  Fly   623 LWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEI 684
            ||||.::|:.|||.|..| ::..::.||.:||.|..|...||.:|||.|....:.||.|.|:
Mosquito  1177 LWEIYSFGRVPYPRIPLA-DVVKHVGSGYKMEAPEGCPPEIYEMMRQAWDLVPEKRPTFAEL 1237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 24/113 (21%)
Ig strand B 121..125 CDD:409353 2/3 (67%)
Ig strand C 134..138 CDD:409353 1/3 (33%)
Ig strand E 157..161 CDD:409353 0/3 (0%)
Ig strand F 171..176 CDD:409353 1/4 (25%)
Ig strand G 184..187 CDD:409353 0/2 (0%)
Ig 200..289 CDD:472250 19/101 (19%)
Ig strand B 216..220 CDD:409353 1/3 (33%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 0/3 (0%)
Ig strand F 269..274 CDD:409353 1/8 (13%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 108/282 (38%)
CskXP_061501935.1 None

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