DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and Pvr

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_061518287.1 Gene:Pvr / 1275672 VectorBaseID:AGAMI1_005611 Length:1480 Species:Anopheles gambiae


Alignment Length:889 Identity:226/889 - (25%)
Similarity:338/889 - (38%) Gaps:283/889 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLFLLLSIWQPAVQVEGRRQMANSQEMIKDHLGARSQNKTPAITNNANQSSTSSADLDDGAADDD 87
            :.|:.|    |.::|..|...|:...  ||    :..:.:|||      ||.|||.|..|     
Mosquito   507 ISFMFL----PCLEVPWRNCSASRTN--KD----KWDSSSPAI------SSESSARLTPG----- 550

  Fly    88 DNKADLPVNVSSKPYWRNPKKMSFLQTRPS----------------------------------G 118
             .|.:.|: ..|:.|...||:...:..|.:                                  |
Mosquito   551 -GKGETPI-AKSRVYTLTPKQPGVVYCRATNLEGSEITEADLLVSDLSDSVMLEKEQPKEAITVG 613

  Fly   119 SLLTLNCHAL-GNPEPNITWYRNG----TVDWTRGYGSLKRNRW--TLTMEDLVPGDCGNYTCKV 176
            ..:|:.|.|| .|....||:..|.    ..|..|...|.:...|  .|.:..:.....|...|:.
Mosquito   614 DHVTIVCSALVYNYTKEITFVHNDKELQESDGVRHDYSAELYAWQARLDIAHVATEHEGPIYCRA 678

  Fly   177 CNSLGCIRHDTQVIVSDRVNH-------KPILMTGPLN--LTLVVNSTGSMHCKYLSDLTSKKAW 232
            ....|.        |..|..|       .|:|::|..|  |::.::....:.|..:.....|..|
Mosquito   679 KTMTGA--------VESRAFHVEVLEPVAPMLVSGKSNESLSVDLHDPLKLECDIVGTPDPKIVW 735

  Fly   233 I--FVPCHGMTNCSNNRSIIAEDKDQLDFVNVRMEQEGWYTCVESNSLGQSNSTAYLRV-VRSLH 294
            :  ..|.....|  :||  :...|..|.|..::.:..|.:.|...|.:|....  |.:| ||:..
Mosquito   736 LKDGEPVRPDEN--SNR--VQLTKTTLIFEYLKTDDLGMFECRAENKMGTIEK--YWKVDVRTAV 794

  Fly   295 VLEAGVASGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIRKMKHEKVLKQRIETVHQWTKKVIIF 359
            |.:           |.:||.:...|:.|....|...:..||.|..|.:|: ...|:.....:.::
Mosquito   795 VRK-----------SVIYIILSLLLVLIVGIVLVSMFYCRKKKEVKAMKE-AGIVNFEEGNLGVY 847

  Fly   360 KPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPRSHLVLGATLGE 424
            .||...|....:                               .|.:|.:|.|:..|.||..||.
Mosquito   848 NPELALDEQADL-------------------------------LPYNSEYEFPKERLKLGKQLGT 881

  Fly   425 GAFGRV-------VMAEVNNAIVAVKMVKEGHTDDDI-ASLVREMEVMKIIGRHINIINLLGCCS 481
            ||||.|       :|...:...|||||||: .||::: .:||.|:::|..:|:|:|::||||..:
Mosquito   882 GAFGVVMKATAQRIMVNEDETTVAVKMVKK-QTDNEVMRALVSELKIMVHLGQHLNVVNLLGAVT 945

  Fly   482 QN---GPLYVIVEYAPHGNLKDFLYKNRPFGRDQ------DRDSS-------------------- 517
            :|   ..|.|||||...||:::||.|:||...||      :.|||                    
Mosquito   946 KNIAKRELMVIVEYCRFGNVQNFLLKHRPHFIDQINQETGEIDSSIDKNQLRWSKCGYQYNSQGL 1010

  Fly   518 --------------QPPPSP--------------------------------------------- 523
                          .|...|                                             
Mosquito  1011 KYVNLSFSTNNVNHHPLQHPTAFYHNNHIDSGSTQYVDPKKHLNSKGYVRHSGLQNMGMVDSCNT 1075

  Fly   524 ---------------------------------PAHVITEKDLIKFAHQIARGMDYLASRRCIHR 555
                                             ||..:...||:.:|.|||.||:|||||:.:|.
Mosquito  1076 EVTAMTSVEVEDLNSVNSNEPLWRSNYGMDYKGPARTVNTTDLVCWASQIACGMEYLASRKVLHG 1140

  Fly   556 DLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYG 620
            ||||||:|:.||.|:||.||||||.:..:|.|:|.....||.||:|.|.:.:..:.:.||||:||
Mosquito  1141 DLAARNILLCDDNVVKICDFGLARSMYKSDNYKKKGEAPLPFKWLALECIGDNVFSTYSDVWAYG 1205

  Fly   621 ILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIV 685
            |:|||:.:.|:.|||.:.:.:|||..|..|.||:||...:.:||.:|..||:...|.||.|.::.
Mosquito  1206 IVLWELFSLGKVPYPGMEANQELYNKLRDGYRMDKPQYSNQDIYDIMLNCWNVKPDSRPSFKDLK 1270

  Fly   686 ---------EYMDKLLQTKEDYL----------DVD-IANLDTP 709
                     :..|..|:..|.||          |.| :|||..|
Mosquito  1271 SRFNAMLPDDMRDHYLELNEPYLQMNAEKMERGDTDYLANLGPP 1314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 21/130 (16%)
Ig strand B 121..125 CDD:409353 1/3 (33%)
Ig strand C 134..138 CDD:409353 2/3 (67%)
Ig strand E 157..161 CDD:409353 2/5 (40%)
Ig strand F 171..176 CDD:409353 1/4 (25%)
Ig strand G 184..187 CDD:409353 0/2 (0%)
Ig 200..289 CDD:472250 19/92 (21%)
Ig strand B 216..220 CDD:409353 0/3 (0%)
Ig strand C 229..233 CDD:409353 1/3 (33%)
Ig strand E 255..259 CDD:409353 1/3 (33%)
Ig strand F 269..274 CDD:409353 1/4 (25%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 132/425 (31%)
PvrXP_061518287.1 None

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