DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and map3k10

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_002938858.3 Gene:map3k10 / 100488058 XenbaseID:XB-GENE-920944 Length:990 Species:Xenopus tropicalis


Alignment Length:357 Identity:110/357 - (30%)
Similarity:160/357 - (44%) Gaps:62/357 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 WTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPRSHL 416
            ||.|:        .|..|...:..:    :...:.|.|....:..|     .||:..:|    .|
 Frog    76 WTGKI--------KDKVGIFPSNYV----VSDNKYTTLTGAPKQCP-----LPLEIEFE----EL 119

  Fly   417 VLGATLGEGAFGRVVMAEVNNAIVAVKMVKEGHTDDDI---ASLVREMEVMKIIGRHINIINLLG 478
            .|...:|.|.||:|.........||||.|:. ..|:||   |..||:...:..:..|.|||.|.|
 Frog   120 NLEEIIGVGGFGKVYKGLWRGDEVAVKAVRH-DPDEDINVTAENVRQEAKLFCMLCHPNIIALKG 183

  Fly   479 CCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARG 543
            .|.:...|.:::|||..|.|...|...:                .||||     |:.:|.|||||
 Frog   184 VCLKPPHLCLVMEYARGGPLHRALAGKK----------------VPAHV-----LVNWAVQIARG 227

  Fly   544 MDYLASRR---CIHRDLAARNVLV-----SDDY---VLKIADFGLARDIQSTDYYRKNTNGRLPI 597
            |:||.:..   .|||||.:.|:|:     .||.   .|||.||||||:.|.|.  :.:..|  ..
 Frog   228 MNYLHNEAIVPIIHRDLKSSNILILEKVEHDDLFNKTLKITDFGLAREWQKTT--KMSAAG--TY 288

  Fly   598 KWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMN 662
            .|||||.::...:...|||||:|:||||::| |:.||..|.:....|...|:...:..|:.|...
 Frog   289 AWMAPEVIRLSLFSKSSDVWSFGVLLWELLT-GEVPYREIDALAVAYGVAMNKLTLPIPSTCPEP 352

  Fly   663 IYILMRQCWHFNADDRPPFTEIVEYMDKLLQT 694
            ...::..||..:...||.|:.|:|.:..:.|:
 Frog   353 FVRILEACWDPDPHSRPSFSCILEQLTTIEQS 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 101/301 (34%)
map3k10XP_002938858.3 SH3_MLK1-3 37..94 CDD:212992 5/29 (17%)
STKc_MLK2 124..381 CDD:271050 96/283 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.