DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment htl and abl2

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_002937405.1 Gene:abl2 / 100487790 XenbaseID:XB-GENE-6459814 Length:1100 Species:Xenopus tropicalis


Alignment Length:557 Identity:157/557 - (28%)
Similarity:233/557 - (41%) Gaps:132/557 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 LVVNSTGSMHCKYLSDLTSKKAWIFVPCHGMTNCSNNRSIIAEDKDQLDFVNVRMEQEGWYTCVE 274
            |..|..|.. |:.||  .:.:.|  ||.:.:|..::                  :|:..||....
 Frog   126 LCYNQNGEW-CEVLS--KNGQGW--VPSNYITPVNS------------------LEKHSWYHGPV 167

  Fly   275 SNSLGQ------SNSTAYLRVVRSLHVLEAGVASGSLHSTSFVYIF----VFGGLIFIFMTTLFV 329
            |.|..:      .|.:..:|...|    ..|..|.||.....||.:    ...|.:::...:.|.
 Frog   168 SRSAAEYLLSSLINGSFLVRESES----SPGQLSISLRYEGRVYHYRINTASDGKVYVTAESRFN 228

  Fly   330 FYAIRKMKHEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQNGNE 394
            ..|.....|..|....:..:|....|.                                    |:
 Frog   229 TLAELVHHHSTVADGLVTILHYPAPKC------------------------------------NK 257

  Fly   395 PAPFNEYEFPLDSNWELPRSHLVLGATLGEGAFGRVVMA--EVNNAIVAVKMVKEGHTDDDIASL 457
            |..:.  ..|:...||:.|:.:.:...||.|.:|.|.:.  :..|..||||.:||...  ::...
 Frog   258 PTVYG--VSPIHDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYNLTVAVKTLKEDTM--EVEEF 318

  Fly   458 VREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPS 522
            ::|..|||.| :|.|::.|||.|:...|.|::.||..:|||.|:|       |:.:|:.      
 Frog   319 LKEAAVMKEI-KHPNLVQLLGVCTLEPPFYIVTEYMHYGNLLDYL-------RECNREE------ 369

  Fly   523 PPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYY 587
                 :|...|:..|.||:..|:||..:..|||||||||.||.:::|:|:|||||:| :.:.|.|
 Frog   370 -----VTAVVLLYMATQISSAMEYLERKNFIHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTY 428

  Fly   588 RKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQR 652
            ..:...:.||||.|||||....:..|||||::|:|||||.|||..|||.| ...::|..|..|.|
 Frog   429 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYDLLEKGYR 492

  Fly   653 MEKPAKCSMNIYILMRQCWHFNADDRPPFTEI------------------------------VEY 687
            ||:|..|...:|.|||.||.:|..|||.|:|.                              |.|
 Frog   493 MEQPEGCPPKVYELMRACWQWNPSDRPSFSETHQAFETMFHDSNINEEVAEELGRTAVTSSSVSY 557

  Fly   688 MDKL--LQTKEDYLDVDIANLDTPPSTSDEEEDETDN 722
            ..:|  |.:|...|.....|.:....|.|..::.|.:
 Frog   558 QCRLPMLPSKSRTLKKKAENKENIEGTGDSSDNSTSS 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250 16/84 (19%)
Ig strand B 216..220 CDD:409353 1/3 (33%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 0/3 (0%)
Ig strand F 269..274 CDD:409353 2/4 (50%)
Ig strand G 282..285 CDD:409353 1/2 (50%)
Protein Kinases, catalytic domain 404..692 CDD:473864 117/321 (36%)
abl2XP_002937405.1 SH3_Abl 100..153 CDD:212784 9/31 (29%)
SH2_ABL 158..251 CDD:198189 20/96 (21%)
PTKc_Abl 270..532 CDD:270645 113/284 (40%)
F_actin_bind 984..1100 CDD:471692
Blue background indicates that the domain is not in the aligned region.

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