DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and epha8

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:XP_031758381.1 Gene:epha8 / 100487286 XenbaseID:XB-GENE-5915618 Length:979 Species:Xenopus tropicalis


Alignment Length:663 Identity:164/663 - (24%)
Similarity:262/663 - (39%) Gaps:185/663 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 PSGSLLTLNCHALGNPEPNITWYRNGT---VDWTRGYGS-----------LKRNRWTLTMEDLVP 166
            |||            || |:....|||   :|||....|           .:|..|         
 Frog   323 PSG------------PE-NLISSVNGTSVSLDWTPPLDSGGRRDVTYNVICRRCAW--------- 365

  Fly   167 GDCGNYTCKVCNSLGCIRHDTQVIVSDRVNHKPILMTGPLNLTLVVNSTGSMHCKYLSDLTSKKA 231
             |.|.  |:.|.  |.:|:..|.:...|.:.....:...:|.|..|.:|..     :||. |.:.
 Frog   366 -DAGQ--CEPCG--GGVRYTPQQMGLARTSLTVANLQAHMNYTFWVEATNG-----VSDF-SLEP 419

  Fly   232 WIFVPCHGMTNCSNNRSIIAEDKDQLDFVNVRMEQEGWYTCV--------ESNSLGQSNSTAYLR 288
            .:|...:..||.:....::|          :| .|:.|.|.:        :.|.:.......|..
 Frog   420 RMFSSVNITTNQAAPSQVLA----------IR-HQKAWQTSISLLWPEPEQPNGVILEYEIKYYE 473

  Fly   289 VVRSLH---VLEA----GVASGSLHSTSFVYIFVFGGLIFIFMTTLFVFYAIR------------ 334
            ..:.:|   .|.|    .:.||....|.:|                   :.:|            
 Frog   474 KGQEMHSYSTLRAKETRAIVSGLKPGTHYV-------------------FQVRARTSAGCGRFSP 519

  Fly   335 --KMKHEKVLKQRIET-VHQW-----------TKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQR 385
              :::..|.:..|..| ...|           ...|:|.|....|.|....|:       .:|: 
 Frog   520 TVEVETSKAMALRYNTRTIVWICLILITGLVILLSVLICKKRHCGYSKAFQDS-------DEKK- 576

  Fly   386 TTVLQNGN----------EPAPFNEYEFPL----DSNWELPRSHLVLGATLGEGAFGRVVMAEV- 435
               ||||:          :|   :.||.|.    |...|:..|.:.:...:|.|.||.|....: 
 Frog   577 ---LQNGHITLAASKLYVDP---HTYEDPCQAVRDFAREIEASRIRIEKIIGSGEFGEVCYGRLK 635

  Fly   436 ----NNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHG 496
                ....||:|.:|.|:::......:.|..:|.... |.|||.|.|..:::....::.||..:|
 Frog   636 VPGKREIPVAIKTLKAGYSEKQRRDFLSEASIMAQFD-HPNIIRLEGVVTRSKLTMIVTEYMENG 699

  Fly   497 NLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARN 561
            :|..||         :.||..       .::|   .|:.....|:.||.||:....|||||||||
 Frog   700 SLDSFL---------KSRDGQ-------FNII---QLVGMLRGISAGMKYLSDLGYIHRDLAARN 745

  Fly   562 VLVSDDYVLKIADFGLARDIQ-STDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWE 625
            :||:::.|.|::||||:|.:: ..|.....|.|::||:|.|||::..:.:.|.|||||:||::||
 Frog   746 ILVNNNMVCKVSDFGLSRILEDDPDAAYTTTGGKIPIRWTAPEAITYRKFSSASDVWSFGIVMWE 810

  Fly   626 IMTYGQQPY------PTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEI 684
            ::.||::||      ..|.|.||       |.|:..|..|...::.||..||..:.::||.|:.|
 Frog   811 VLAYGERPYWNMTNRDVINSVEE-------GYRLPAPMGCPAALHQLMLDCWQRDRNERPRFSLI 868

  Fly   685 VEYMDKLLQTKED 697
            |..:|..|:..|:
 Frog   869 VSVLDNFLRNPEN 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250 22/88 (25%)
Ig strand B 121..125 CDD:409353 0/3 (0%)
Ig strand C 134..138 CDD:409353 1/3 (33%)
Ig strand E 157..161 CDD:409353 1/3 (33%)
Ig strand F 171..176 CDD:409353 1/4 (25%)
Ig strand G 184..187 CDD:409353 1/2 (50%)
Ig 200..289 CDD:472250 17/96 (18%)
Ig strand B 216..220 CDD:409353 0/3 (0%)
Ig strand C 229..233 CDD:409353 0/3 (0%)
Ig strand E 255..259 CDD:409353 0/3 (0%)
Ig strand F 269..274 CDD:409353 2/12 (17%)
Ig strand G 282..285 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 404..692 CDD:473864 96/303 (32%)
epha8XP_031758381.1 EphR_LBD 25..197 CDD:470656
FN3 <305..>528 CDD:442628 48/267 (18%)
FN3 434..525 CDD:238020 15/120 (13%)
EphA2_TM 541..612 CDD:464211 17/84 (20%)
Protein Kinases, catalytic domain 610..876 CDD:473864 93/292 (32%)
SAM_EPH-A8 905..969 CDD:188949
Blue background indicates that the domain is not in the aligned region.

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