DRSC/TRiP Functional Genomics Resources

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Protein Alignment htl and csk

DIOPT Version :10

Sequence 1:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster
Sequence 2:NP_001135615.1 Gene:csk / 100216174 XenbaseID:XB-GENE-5771921 Length:450 Species:Xenopus tropicalis


Alignment Length:374 Identity:121/374 - (32%)
Similarity:194/374 - (51%) Gaps:63/374 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 VFYAIRKMK--HEKVLKQRIETVHQWTKKVIIFKPEGGGDSSGSMDTMIMPVVRIQKQRTTVLQN 391
            :.|:..|:.  .|:..:..::.|..:|           .|:.|....::.|.:   .:.|...|:
 Frog   131 IIYSSGKLSIDEEEYFENLMQLVEHYT-----------NDADGLCTNLMKPKL---VEGTVAAQD 181

  Fly   392 GNEPAPFNEYEFPLDSNWELPRSHLVLGATLGEGAFGRVVMAEVNNAIVAVKMVKEGHTDDDIAS 456
                      ||. .|.|.|....|.|..|:|:|.||.|::.|.....||||.:|   .|....:
 Frog   182 ----------EFS-RSGWALKMRDLKLLHTIGKGEFGDVMLGEHQGVKVAVKCIK---NDATAQA 232

  Fly   457 LVREMEVMKIIGRHINIINLLGCCSQN-GPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPP 520
            .|.|..||..: :|.|::.|||...:: ..|:::.|:...|:|.|:|   |..||.         
 Frog   233 FVAEAMVMTQL-QHNNLVQLLGVIVEDKSGLFIVTEFMAKGSLVDYL---RSRGRS--------- 284

  Fly   521 PSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAARNVLVSDDYVLKIADFGLARD---IQ 582
                  |:..:.|:||:..::.||.||.|...:||||||||||||::.:.|::||||.::   ||
 Frog   285 ------VLGGECLLKFSLDVSEGMAYLESNNFVHRDLAARNVLVSEENIAKVSDFGLTKEASAIQ 343

  Fly   583 STDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYL 647
            .|        .:||:||.|||:|::|.:.:||||||:|||||||.::|:.|||.| :.:::...:
 Frog   344 DT--------SKLPVKWTAPEALRDKLFSTKSDVWSFGILLWEIYSFGRVPYPRI-ALKDVVPKV 399

  Fly   648 MSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIVEYMDKLLQTKE 696
            .:|.:|:.|..|...:|.||:||||.:...||.|..:.|.::. ::.||
 Frog   400 ENGYKMDAPDGCPPVVYDLMKQCWHLDPKQRPTFRNLREQLEH-IKAKE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 107/291 (37%)
cskNP_001135615.1 SH3_CSK 11..67 CDD:212703
SH2_csk_like 78..175 CDD:198190 8/57 (14%)
Protein Kinases, catalytic domain 188..443 CDD:473864 106/286 (37%)
Blue background indicates that the domain is not in the aligned region.

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